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SCNpilot_expt_500_bf_scaffold_1759

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1759_1
Oikopleura dioica, Oikopleura, Appendicularia, Chordata, Metazoa

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comp(3..347)
DNA (345bp) protein (115aa)
Whole genome shotgun assembly, allelic scaffold set, scaffold scaffoldA_2102 (Fragment) n=1 Tax=Oikopleura dioica RepID=E4Z0T3_OIKDI
Whole genome shotgun assembly, allelic scaffold set, scaffold scaffoldA_2102 {ECO:0000313|EMBL:CBY41311.1}; Flags: Fragment;; TaxID=34765 species="Eukaryota; Metazoa; Chordata; Tunicata; Appendicularia; Oikopleuridae; Oikopleura.;" source="Oikopleura dioica (Tunicate).;"
SCNpilot_expt_500_bf_scaffold_1759_2
unknown

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comp(388..672)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_3
unknown

Not on your lists

742..996
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_4
unknown

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comp(1037..1321)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_5
Oreochromis niloticus, Oreochromis, Cichliformes, Neopterygii, Chordata, Metazoa

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comp(1324..3018)
DNA (1695bp) protein (565aa)
PREDICTED: breast cancer type 1 susceptibility protein homolog isoform X2 n=1 Tax=Haplochromis burtoni RepID=UPI0003BD86FF
Uncharacterized protein {ECO:0000313|Ensembl:ENSONIP00000020556}; TaxID=8128 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis.;" source="Oreochromis niloticus (Nile tilapia) (Tilapia nilotica).;"
breast cancer type 1 susceptibility protein homolog
SCNpilot_expt_500_bf_scaffold_1759_6
unknown

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3650..3913
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_7
unknown

Not on your lists

3977..4645
DNA (669bp) protein (223aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_8
unknown

Not on your lists

comp(4726..4869)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_9
unknown

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comp(5453..5665)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_10
unknown

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comp(5857..6027)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_11
unknown

Not on your lists

comp(6850..7206)
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_12
unknown

Not on your lists

comp(7414..7827)
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_13
unknown

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comp(8090..9067)
DNA (978bp) protein (326aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_14
unknown

Not on your lists

9633..10103
DNA (471bp) protein (157aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_15
unknown

Not on your lists

12345..12521
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_16
Paulinella chromatophora, Paulinella, Euglyphida, Eukaryota

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13280..14317
DNA (1038bp) protein (346aa)
SqdX n=1 Tax=Paulinella chromatophora RepID=B1X4K0_PAUCH
SqdX {ECO:0000313|EMBL:ACB42869.1}; TaxID=39717 species="Eukaryota; Rhizaria; Cercozoa; Silicofilosea; Euglyphida; Paulinellidae; Paulinella.;" source="Paulinella chromatophora.;"
glycosyltransferase
SCNpilot_expt_500_bf_scaffold_1759_17
Euperipatoides kanangrensis, Euperipatoides, Onychophora, Metazoa

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comp(16083..16568)
DNA (486bp) protein (162aa)
Protein Wnt n=1 Tax=Tribolium castaneum RepID=D6WRU0_TRICA
Protein Wnt {ECO:0000256|RuleBase:RU003500}; TaxID=488523 species="Eukaryota; Metazoa; Ecdysozoa; Onychophora; Peripatopsidae; Euperipatoides.;" source="Euperipatoides kanangrensis.;"
Wnt5; similar to wingless-type MMTV integration site family, member 5B precursor; K00444 wingless-type MMTV integration site family, member 5
SCNpilot_expt_500_bf_scaffold_1759_18
Strongyloides ratti, Strongyloides, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(16605..16964)
DNA (360bp) protein (120aa)
Protein Wnt {ECO:0000256|RuleBase:RU003500}; TaxID=34506 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Panagrolaimoidea; Strongyloididae; Strongyloides.;" source="Strongyloides ratti (Parasitic roundworm).;"
SCNpilot_expt_500_bf_scaffold_1759_19
unknown

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comp(18831..18974)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_20
Acyrthosiphon pisum, Acyrthosiphon, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

20253..20591
DNA (339bp) protein (113aa)
DNA polymerase eta-like; K03509 DNA polymerase eta subunit [EC:2.7.7.7]
Uncharacterized protein n=1 Tax=Acyrthosiphon pisum RepID=J9K116_ACYPI
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:ACYPI006435-PA}; TaxID=7029 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon.;" source="Acyrthosiphon pisum (Pea aphid).;"
SCNpilot_expt_500_bf_scaffold_1759_21
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

21222..21779
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7U745_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELT99496.1, ECO:0000313|EnsemblMetazoa:CapteP172544}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
SCNpilot_expt_500_bf_scaffold_1759_22
unknown

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21905..22756
DNA (852bp) protein (284aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_23
unknown

Not on your lists

22758..22952
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_24
Homo sapiens, Homo, Primates, Mammalia, Chordata, Metazoa

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comp(23938..24354)
DNA (417bp) protein (139aa)
40S ribosomal protein S5 n=1 Tax=Homo sapiens RepID=M0QZN2_HUMAN
40S ribosomal protein S5 {ECO:0000313|Ensembl:ENSP00000470660}; TaxID=9606 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.;" source="Homo sapiens (Human).;"
similar to 40S ribosomal protein S5; K02989 small subunit ribosomal protein S5e
SCNpilot_expt_500_bf_scaffold_1759_25
unknown

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comp(24608..24754)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_26
unknown

Not on your lists

25413..25598
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_27
unknown

Not on your lists

25973..26194
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_28
unknown

Not on your lists

26194..26388
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1759_29
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

26708..27133
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Crassostrea gigas RepID=K1S2Y0_CRAGI
Uncharacterized protein {ECO:0000313|EMBL:EKC41721.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
uncharacterized protein LOC551214
SCNpilot_expt_500_bf_scaffold_1759_30
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

27485..27910
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Crassostrea gigas RepID=K1S2Y0_CRAGI
Uncharacterized protein {ECO:0000313|EMBL:EKC41721.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
hypothetical protein
Displaying items 1-30 of 39 in total

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