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SCNpilot_expt_500_bf_scaffold_1814

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1814_1
unknown

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comp(903..1253)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1814_2
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

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4235..4546
DNA (312bp) protein (104aa)
similar to Protein kinase C, alpha type (PKC-alpha) (PKC-A); K02677 classical protein kinase C [EC:2.7.11.13]
Protein kinase C {ECO:0000256|PIRNR:PIRNR000550, ECO:0000256|SAAS:SAAS00253193}; EC=2.7.11.13 {ECO:0000256|PIRNR:PIRNR000550, ECO:0000256|SAAS:SAAS00253193};; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3HHE9_STRPU
SCNpilot_expt_500_bf_scaffold_1814_3
Euperipatoides kanangrensis, Euperipatoides, Onychophora, Metazoa

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4937..5383
DNA (447bp) protein (149aa)
PREDICTED: protein kinase C, brain isozyme-like n=1 Tax=Metaseiulus occidentalis RepID=UPI00026584AF
Eka-inaC1 protein {ECO:0000313|EMBL:CFW94230.1}; TaxID=488523 species="Eukaryota; Metazoa; Ecdysozoa; Onychophora; Peripatopsidae; Euperipatoides.;" source="Euperipatoides kanangrensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1814_4
Acyrthosiphon pisum, Acyrthosiphon, Hemiptera, Neoptera, Arthropoda, Metazoa

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5414..5554
DNA (141bp) protein (47aa)
protein kinase C, brain isozyme-like; K02677 classical protein kinase C [EC:2.7.11.13]
Protein kinase C {ECO:0000256|PIRNR:PIRNR000550, ECO:0000256|SAAS:SAAS00253193}; EC=2.7.11.13 {ECO:0000256|PIRNR:PIRNR000550, ECO:0000256|SAAS:SAAS00253193};; TaxID=7029 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon.;" source="Acyrthosiphon pisum (Pea aphid).;"
PREDICTED: protein kinase C, brain isozyme-like n=1 Tax=Apis florea RepID=UPI000252B1C2
SCNpilot_expt_500_bf_scaffold_1814_5
Ophiophagus hannah, Ophiophagus, Squamata, Chordata, Metazoa

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5578..5883
DNA (306bp) protein (102aa)
AGAP012252-PA; K02677 classical protein kinase C [EC:2.7.11.13]
Uncharacterized protein (Fragment) n=1 Tax=Strigamia maritima RepID=T1IXL6_STRMM
Protein kinase C alpha type {ECO:0000313|EMBL:ETE60956.1}; Flags: Fragment;; TaxID=8665 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Elapinae; Ophiophagus.;" source="Ophiophagus hannah (King cobra) (Naja hannah).;"
SCNpilot_expt_500_bf_scaffold_1814_6
Egretta garzetta, Egretta, Pelecaniformes, Aves, Chordata, Metazoa

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6439..6837
DNA (399bp) protein (133aa)
protein kinase C, putative (EC:2.7.1.107 2.7.11.13); K02677 classical protein kinase C [EC:2.7.11.13]
Protein kinase C n=1 Tax=Ixodes scapularis RepID=B7PWS6_IXOSC
Protein kinase C theta type {ECO:0000313|EMBL:KFP10764.1}; Flags: Fragment;; TaxID=188379 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Ardeidae; Egretta.;" source="Egretta garzetta (little egret).;"
SCNpilot_expt_500_bf_scaffold_1814_7
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

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6918..7076
DNA (159bp) protein (53aa)
Cbr-pkc-2; C. briggsae CBR-PKC-2 protein; K02677 classical protein kinase C [EC:2.7.11.13]
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4B6K8_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:CEK57736.1}; Flags: Fragment;; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupulmonata; Stylommatophora; Sigmurethra; Arionoidea; Arionidae; Arion.;" source="Arion vulgaris.;"
SCNpilot_expt_500_bf_scaffold_1814_8
Scleropages formosus, Scleropages, Osteoglossiformes, Neopterygii, Chordata, Metazoa

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7138..7371
DNA (234bp) protein (78aa)
PREDICTED: protein kinase C alpha type isoform X2 n=1 Tax=Heterocephalus glaber RepID=UPI00034F5CE0
Protein kinase C alpha type-like {ECO:0000313|EMBL:KKX20133.1}; TaxID=113540 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages.;" source="Scleropages formosus (Asian bonytongue).;"
Prkca; protein kinase C, alpha
SCNpilot_expt_500_bf_scaffold_1814_9
unknown

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comp(8475..9098)
DNA (624bp) protein (208aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1814_10
unknown

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comp(9314..9859)
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1814_11
Gasterosteus aculeatus, Gasterosteus, Perciformes, Neopterygii, Chordata, Metazoa

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comp(10176..10466)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Gasterosteus aculeatus RepID=G3NSV9_GASAC
Uncharacterized protein {ECO:0000313|Ensembl:ENSGACP00000008427}; TaxID=69293 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus.;" source="Gasterosteus aculeatus (Three-spined stickleback).;"
synaptic vesicle membrane protein VAT-1 homolog
SCNpilot_expt_500_bf_scaffold_1814_12
unknown

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comp(10508..10729)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1814_13
Neovison vison, Neovison, Carnivora, Mammalia, Chordata, Metazoa

Not on your lists

comp(10945..11187)
DNA (243bp) protein (81aa)
PREDICTED: synaptic vesicle membrane protein VAT-1 homolog n=1 Tax=Odobenus rosmarus divergens RepID=UPI0002C55AAD
Uncharacterized protein {ECO:0000313|EMBL:CCP74367.1}; TaxID=452646 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Mustelinae; Neovison.;" source="Neovison vison (American mink) (Mustela vison).;"
VAT1, SLC18A1; vesicle amine transport protein 1 homolog (T. californica)
SCNpilot_expt_500_bf_scaffold_1814_14
Zootermopsis nevadensis, Zootermopsis, Isoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(11770..11973)
DNA (204bp) protein (68aa)
V-type proton ATPase subunit C {ECO:0000313|EMBL:KDR10550.1}; TaxID=136037 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Orthopteroidea; Dictyoptera; Isoptera; Termopsidae; Zootermopsis.;" source="Zootermopsis nevadensis (Dampwood termite).;"
SCNpilot_expt_500_bf_scaffold_1814_15
Caenorhabditis remanei, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(12028..12165)
DNA (138bp) protein (46aa)
Cbr-vha-11; C. briggsae CBR-VHA-11 protein; K02148 V-type H+-transporting ATPase subunit C [EC:3.6.3.14]
CRE-VHA-11 protein n=1 Tax=Caenorhabditis remanei RepID=E3N9V9_CAERE
CRE-VHA-11 protein {ECO:0000313|EMBL:EFO90482.1}; TaxID=31234 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis remanei (Caenorhabditis vulgaris).;"
SCNpilot_expt_500_bf_scaffold_1814_16
unknown

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comp(13088..13237)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1814_17
unknown

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13727..13954
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1814_18
unknown

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15781..16170
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1814_19
unknown

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16654..17067
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1814_20
Tribolium castaneum, Tribolium, Coleoptera, Neoptera, Arthropoda, Metazoa

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17143..17469
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D7EIL4_TRICA
similar to CG8907-PA
Putative uncharacterized protein {ECO:0000313|EMBL:EFA12049.1}; TaxID=7070 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium.;" source="Tribolium castaneum (Red flour beetle).;"
SCNpilot_expt_500_bf_scaffold_1814_21
unknown

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17551..17874
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1814_22
unknown

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comp(18521..18769)
DNA (249bp) protein (83aa)

This feature has no annotations

Displaying 22 items

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