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SCNpilot_expt_500_bf_scaffold_1820

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1820_1
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

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2191..2460
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XXR7_BRAFL
hypothetical protein; K10414 dynein heavy chain 2, cytosolic
Putative uncharacterized protein {ECO:0000313|EMBL:EEN67527.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_1820_2
Poecilia formosa, Poecilia, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

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2503..2937
DNA (435bp) protein (145aa)
PREDICTED: cytoplasmic dynein 2 heavy chain 1-like n=1 Tax=Aplysia californica RepID=UPI000359B1EA
Uncharacterized protein {ECO:0000313|Ensembl:ENSPFOP00000006494}; TaxID=48698 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia.;" source="Poecilia formosa (Amazon molly) (Limia formosa).;"
hypothetical protein; K10414 dynein heavy chain 2, cytosolic
SCNpilot_expt_500_bf_scaffold_1820_3
Ciona savignyi, Ciona, Enterogona, Ascidiacea, Chordata, Metazoa

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3182..3487
DNA (306bp) protein (102aa)
Uncharacterized protein (Fragment) n=1 Tax=Ciona savignyi RepID=H2ZF03_CIOSA
cytoplasmic dynein 2 heavy chain 1-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSCSAVP00000016169}; TaxID=51511 species="Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona.;" source="Ciona savignyi (Pacific transparent sea squirt).;"
SCNpilot_expt_500_bf_scaffold_1820_4
Ficedula albicollis, Ficedula, Passeriformes, Aves, Chordata, Metazoa

Not on your lists

4172..4513
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ficedula albicollis RepID=U3JCB6_FICAL
Uncharacterized protein {ECO:0000313|Ensembl:ENSFALP00000000420}; TaxID=59894 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.;" source="Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).;"
cytoplasmic dynein 2 heavy chain 1-like
SCNpilot_expt_500_bf_scaffold_1820_5
unknown

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4770..4907
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_6
unknown

Not on your lists

5580..5801
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_7
unknown

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comp(6024..7106)
DNA (1083bp) protein (361aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_8
unknown

Not on your lists

8396..8554
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_9
unknown

Not on your lists

8551..8856
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_10
unknown

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comp(8830..9006)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_11
unknown

Not on your lists

comp(9049..9204)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_12
unknown

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9349..9660
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_13
unknown

Not on your lists

10449..11294
DNA (846bp) protein (282aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_14
unknown

Not on your lists

11661..11927
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_15
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

Not on your lists

12343..12606
DNA (264bp) protein (88aa)
Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Helobdella robusta RepID=T1FXH0_HELRO
Eukaryotic translation initiation factor 3 subunit A {ECO:0000256|SAAS:SAAS00003684}; Flags: Fragment;; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupulmonata; Stylommatophora; Sigmurethra; Arionoidea; Arionidae; Arion.;" source="Arion vulgaris.;"
similar to Eukaryotic translation initiation factor 3, subunit 10 (theta); K03254 translation initiation factor 3 subunit A
SCNpilot_expt_500_bf_scaffold_1820_16
Ornithorhynchus anatinus, Ornithorhynchus, Monotremata, Mammalia, Chordata, Metazoa

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12772..15588
DNA (2817bp) protein (939aa)
Uncharacterized protein (Fragment) n=1 Tax=Ornithorhynchus anatinus RepID=F6RJ68_ORNAN rbh
EIF6, EIF3A; eukaryotic translation initiation factor 6; K03254 translation initiation factor 3 subunit A rbh
Eukaryotic translation initiation factor 3 subunit A {ECO:0000256|SAAS:SAAS00003684}; TaxID=9258 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus.;" source="Ornithorhynchus anatinus (Duckbill platypus).;"
SCNpilot_expt_500_bf_scaffold_1820_17
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

16038..16418
DNA (381bp) protein (127aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E5U9_HORVD
Predicted protein {ECO:0000313|EMBL:BAK02721.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_1820_18
unknown

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comp(16604..16789)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_19
unknown

Not on your lists

comp(18613..18963)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_20
unknown

Not on your lists

comp(19092..19379)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_21
Strigamia maritima, Strigamia, Geophilomorpha, Pleurostigmophora, Arthropoda, Metazoa

Not on your lists

comp(19935..20099)
DNA (165bp) protein (55aa)
hypothetical protein; K05961 deoxynucleoside kinase [EC:2.7.1.145]
Uncharacterized protein n=1 Tax=Strigamia maritima RepID=T1J4A4_STRMM
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SMAR008435-PA}; TaxID=126957 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda; Pleurostigmophora; Geophilomorpha; Linotaeniidae; Strigamia.;" source="Strigamia maritima (European centipede) (Geophilus maritimus).;"
SCNpilot_expt_500_bf_scaffold_1820_22
unknown

Not on your lists

comp(21478..21639)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_23
Rhipicephalus pulchellus, Rhipicephalus, Ixodida, Acari, Arthropoda, Metazoa

Not on your lists

22791..23111
DNA (321bp) protein (107aa)
Putative actin filament-binding protein afadin n=1 Tax=Rhipicephalus pulchellus RepID=L7M969_9ACAR
Putative actin filament-binding protein afadin {ECO:0000313|EMBL:JAA59639.1}; TaxID=72859 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus.;" source="Rhipicephalus pulchellus.;"
SCNpilot_expt_500_bf_scaffold_1820_24
unknown

Not on your lists

comp(23291..23620)
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_25
unknown

Not on your lists

23673..23957
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_26
unknown

Not on your lists

comp(23959..24174)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_27
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

Not on your lists

24482..24982
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V3ZX65_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:CEK61121.1}; Flags: Fragment;; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupulmonata; Stylommatophora; Sigmurethra; Arionoidea; Arionidae; Arion.;" source="Arion vulgaris.;"
mllt4, af-6, af6; myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog); translocated to, 4; K05702 afadin
SCNpilot_expt_500_bf_scaffold_1820_28
Amblyomma triste, Amblyomma, Ixodida, Acari, Arthropoda, Metazoa

Not on your lists

25038..25340
DNA (303bp) protein (101aa)
Putative actin filament-binding protein afadin n=1 Tax=Rhipicephalus pulchellus RepID=L7M969_9ACAR
Putative actin filament-binding protein afadin {ECO:0000313|EMBL:JAC34146.1}; Flags: Fragment;; TaxID=251400 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Amblyomminae; Amblyomma.;" source="Amblyomma triste.;"
hypothetical protein ; K05702 afadin
SCNpilot_expt_500_bf_scaffold_1820_29
unknown

Not on your lists

25870..26061
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1820_30
unknown

Not on your lists

26061..26243
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying items 1-30 of 46 in total

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