ggKbase home page

SCNpilot_expt_500_bf_scaffold_1874

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1874_1
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

3..242
DNA (240bp) protein (80aa)
Myosin-VI n=1 Tax=Crassostrea gigas RepID=K1Q1S3_CRAGI
Myosin-VI {ECO:0000313|EMBL:EKC25309.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
hypothetical protein ; K10358 myosin VI
SCNpilot_expt_500_bf_scaffold_1874_2
Apis mellifera, Apis, Hymenoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

254..469
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:GB48851-PA}; TaxID=7460 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis.;" source="Apis mellifera (Honeybee).;"
SCNpilot_expt_500_bf_scaffold_1874_3
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

426..752
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7U9G6_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELT99775.1, ECO:0000313|EnsemblMetazoa:CapteP154601}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
myosin heavy chain 95F, putative; K10358 myosin VI
SCNpilot_expt_500_bf_scaffold_1874_4
unknown

Not on your lists

2575..2730
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_5
unknown

Not on your lists

2928..3137
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_6
unknown

Not on your lists

3130..3501
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_7
unknown

Not on your lists

4843..5046
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_8
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

5466..6029
DNA (564bp) protein (188aa)
PREDICTED: sodium/hydrogen exchanger 5-like isoform X1 n=1 Tax=Aplysia californica RepID=UPI0003598CA1
hypothetical protein; K12040 solute carrier family 9 (sodium/hydrogen exchanger), member 3
Sodium/hydrogen exchanger {ECO:0000256|RuleBase:RU003722}; Flags: Fragment;; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_1874_9
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

6102..6332
DNA (231bp) protein (77aa)
Sodium/hydrogen exchanger (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3Z1B7_BRAFL
hypothetical protein; K12040 solute carrier family 9 (sodium/hydrogen exchanger), member 3
Sodium/hydrogen exchanger {ECO:0000256|RuleBase:RU003722}; Flags: Fragment;; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_1874_10
Musca domestica, Musca, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

6286..6609
DNA (324bp) protein (108aa)
Sodium/hydrogen exchanger n=2 Tax=Musca domestica RepID=T1PBI0_MUSDO
Sodium/hydrogen exchanger {ECO:0000256|RuleBase:RU003722}; TaxID=7370 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Musca.;" source="Musca domestica (House fly).;"
GK24318 gene product from transcript GK24318-RA; K12040 solute carrier family 9 (sodium/hydrogen exchanger), member 3
SCNpilot_expt_500_bf_scaffold_1874_11
unknown

Not on your lists

comp(6924..7298)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_12
unknown

Not on your lists

7434..7802
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_13
unknown

Not on your lists

comp(9017..9460)
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_14
Philodina roseola, Philodina, Philodinida, Bdelloidea, Rotifera, Metazoa

Not on your lists

10992..11690
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Philodina roseola RepID=B6S342_PHIRO
Putative uncharacterized protein {ECO:0000313|EMBL:ACI90362.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina roseola (Rotifer).;"
SCNpilot_expt_500_bf_scaffold_1874_15
unknown

Not on your lists

11698..12087
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_16
unknown

Not on your lists

12429..12674
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_17
unknown

Not on your lists

12750..12872
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_18
unknown

Not on your lists

12949..13257
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_19
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14049..14612)
DNA (564bp) protein (188aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SSU2_FERBD
short-chain dehydrogenase/reductase SDR
Oxidoreductase {ECO:0000313|EMBL:KHT60505.1}; TaxID=1295392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbulicola.;"
SCNpilot_expt_500_bf_scaffold_1874_20
unknown

Not on your lists

comp(14944..15996)
DNA (1053bp) protein (351aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_21
unknown

Not on your lists

comp(16305..16481)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_22
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

17006..17620
DNA (615bp) protein (205aa)
CMP/dCMP deaminase protein (EC:3.5.4.1); K01485 cytosine deaminase [EC:3.5.4.1]
CMP/dCMP deaminase zinc-binding protein {ECO:0000313|EMBL:ADR33679.1}; EC=3.5.4.1 {ECO:0000313|EMBL:ADR33679.1};; TaxID=709032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 /; YK-1).;"
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U309_SULKY
SCNpilot_expt_500_bf_scaffold_1874_23
unknown

Not on your lists

comp(17688..18122)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_24
unknown

Not on your lists

comp(18425..19549)
DNA (1125bp) protein (375aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_25
unknown

Not on your lists

comp(19639..19890)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_26
Brachionus calyciflorus, Brachionus, Ploimida, Monogononta, Rotifera, Metazoa

Not on your lists

comp(19942..20547)
DNA (606bp) protein (202aa)
RECQL, RECQL1; RecQ protein-like (DNA helicase Q1-like) (EC:3.6.4.12); K10899 ATP-dependent DNA helicase Q1 [EC:3.6.4.12]
RecQ1 (Fragment) n=1 Tax=Brachionus calyciflorus RepID=M4SZB6_9BILA
RecQ1 {ECO:0000313|EMBL:AGH55797.1}; Flags: Fragment;; TaxID=104777 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Monogononta; Ploimida; Brachionidae; Brachionus.;" source="Brachionus calyciflorus.;"
SCNpilot_expt_500_bf_scaffold_1874_27
Brachionus calyciflorus, Brachionus, Ploimida, Monogononta, Rotifera, Metazoa

Not on your lists

comp(20669..20974)
DNA (306bp) protein (102aa)
RecQ protein-like (DNA helicase Q1-like); K10899 ATP-dependent DNA helicase Q1 [EC:3.6.4.12]
RECQ1 (Fragment) n=1 Tax=Brachionus calyciflorus RepID=M4SZB2_9BILA
RECQ1 {ECO:0000313|EMBL:AGH55792.1}; Flags: Fragment;; TaxID=104777 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Monogononta; Ploimida; Brachionidae; Brachionus.;" source="Brachionus calyciflorus.;"
SCNpilot_expt_500_bf_scaffold_1874_28
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

Not on your lists

comp(20925..21284)
DNA (360bp) protein (120aa)
hypothetical protein; K10899 ATP-dependent DNA helicase Q1 [EC:3.6.4.12]
PREDICTED: ATP-dependent DNA helicase Q1-like n=1 Tax=Aplysia californica RepID=UPI00035952B4
Uncharacterized protein {ECO:0000313|EMBL:CEK84262.1}; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupulmonata; Stylommatophora; Sigmurethra; Arionoidea; Arionidae; Arion.;" source="Arion vulgaris.;"
SCNpilot_expt_500_bf_scaffold_1874_29
unknown

Not on your lists

22579..22842
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1874_30
unknown

Not on your lists

comp(22923..23156)
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying items 1-30 of 59 in total

View Taxonomy