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SCNpilot_expt_500_bf_scaffold_1989

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1989_1
unknown

Not on your lists

comp(3..521)
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1989_2
unknown

Not on your lists

582..860
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1989_3
Petromyzon marinus, Petromyzon, Petromyzontiformes, Chordata, Metazoa

Not on your lists

848..1480
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Petromyzon marinus RepID=S4RBG2_PETMA
Uncharacterized protein {ECO:0000313|Ensembl:ENSPMAP00000002543}; TaxID=7757 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon.;" source="Petromyzon marinus (Sea lamprey).;"
adiponectin receptor protein 1-like
SCNpilot_expt_500_bf_scaffold_1989_4
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(1897..2220)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0ZAA8_9CHLO
Uncharacterized protein {ECO:0000313|EMBL:EIE27577.1}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-169.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1989_5
unknown

Not on your lists

comp(2841..3020)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1989_6
unknown

Not on your lists

comp(3183..3431)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1989_7
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

Not on your lists

comp(3896..4147)
DNA (252bp) protein (84aa)
PREDICTED: cold shock domain containing E1, RNA binding-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB9596
Uncharacterized protein {ECO:0000313|EMBL:ESN92067.1, ECO:0000313|EnsemblMetazoa:HelroP104068}; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella.;" source="Helobdella robusta (Californian leech).;"
cold shock domain-containing protein E1-like
SCNpilot_expt_500_bf_scaffold_1989_8
Rattus norvegicus, Rattus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

comp(4239..4670)
DNA (432bp) protein (144aa)
PREDICTED: cold shock domain-containing protein E1-like n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0002652FB7
cold shock domain-containing protein E1-like
Cold shock domain-containing protein E1; Protein UNR; TaxID=10116 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.;" source="Rattus norvegicus (Rat).;"
SCNpilot_expt_500_bf_scaffold_1989_9
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(5033..5287)
DNA (255bp) protein (85aa)
Cold shock domain-containing protein E1 n=1 Tax=Crassostrea gigas RepID=K1PVZ3_CRAGI
Cold shock domain-containing protein E1 {ECO:0000313|EMBL:EKC28502.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
similar to AGAP004937-PA
SCNpilot_expt_500_bf_scaffold_1989_10
unknown

Not on your lists

comp(5761..6054)
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1989_11
Balearica regulorum, Balearica, Gruiformes, Aves, Chordata, Metazoa

Not on your lists

comp(6239..6694)
DNA (456bp) protein (152aa)
PREDICTED: DNA repair protein complementing XP-G cells n=1 Tax=Falco peregrinus RepID=UPI0003870949
DNA repair protein complementing XP-G cells {ECO:0000313|EMBL:KFO12780.1}; Flags: Fragment;; TaxID=100784 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Gruiformes; Gruidae; Balearica.;" source="Balearica regulorum gibbericeps (East African grey crowned-crane).;"
ERCC5; excision repair cross-complementing rodent repair deficiency, complementation group 5
SCNpilot_expt_500_bf_scaffold_1989_12
unknown

Not on your lists

comp(6753..7256)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1989_13
unknown

Not on your lists

comp(7246..7746)
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1989_14
unknown

Not on your lists

comp(8047..8280)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1989_15
unknown

Not on your lists

comp(9060..9758)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1989_16
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(9769..10449)
DNA (681bp) protein (227aa)
Ceruloplasmin n=1 Tax=Crassostrea gigas RepID=K1QSH0_CRAGI
Ceruloplasmin {ECO:0000313|EMBL:EKC34134.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
leng9; leukocyte receptor cluster (LRC) member 9
SCNpilot_expt_500_bf_scaffold_1989_17
Hyriopsis schlegelii, Hyriopsis, Unionoida, Palaeoheterodonta, Mollusca, Metazoa

Not on your lists


11360..11602
DNA (243bp) protein (81aa)
Putative tumor suppressor QM protein (Fragment) n=1 Tax=Hyriopsis schlegelii RepID=A8UMW5_9BIVA
Putative tumor suppressor QM protein {ECO:0000313|EMBL:ABW86313.1}; Flags: Fragment;; TaxID=319528 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Palaeoheterodonta; Unionoida; Unionoidea; Unionidae; Unioninae; Hyriopsis.;" source="Hyriopsis schlegelii (Biwa pearly mussel).;"
hypothetical protein; K02866 large subunit ribosomal protein L10e
SCNpilot_expt_500_bf_scaffold_1989_18
Marsupenaeus japonicus, Marsupenaeus, Decapoda, Eumalacostraca, Arthropoda, Metazoa

Not on your lists

11646..11888
DNA (243bp) protein (81aa)
QM protein n=1 Tax=Penaeus japonicus RepID=A7LCK6_PENJP
QM protein {ECO:0000313|EMBL:ABS45569.1}; TaxID=27405 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Marsupenaeus.;" source="Penaeus japonicus (Kuruma prawn) (Marsupenaeus japonicus).;"
RpL10; 60S ribosomal protein L10; K02866 large subunit ribosomal protein L10e
SCNpilot_expt_500_bf_scaffold_1989_19
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(12329..12664)
DNA (336bp) protein (112aa)
uncharacterized LOC593569; K12348 acid ceramidase [EC:3.5.1.23]
PREDICTED: acid ceramidase-like n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0002651D58
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_008640-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
SCNpilot_expt_500_bf_scaffold_1989_20
Trichoplax adhaerens, Trichoplax, Placozoa, Metazoa

Not on your lists

comp(12661..12933)
DNA (273bp) protein (91aa)
hypothetical protein ; K12348 acid ceramidase [EC:3.5.1.23]
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S6Y5_TRIAD
Putative uncharacterized protein {ECO:0000313|EMBL:EDV21392.1}; TaxID=10228 species="Eukaryota; Metazoa; Placozoa; Trichoplax.;" source="Trichoplax adhaerens (Trichoplax reptans).;"
SCNpilot_expt_500_bf_scaffold_1989_21
Xiphophorus maculatus, Xiphophorus, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(13163..13360)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Xiphophorus maculatus RepID=M4A016_XIPMA
Uncharacterized protein {ECO:0000313|Ensembl:ENSXMAP00000007810}; TaxID=8083 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus.;" source="Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).;"
ASAH; acid ceramidase-like
SCNpilot_expt_500_bf_scaffold_1989_22
Amblyomma cajennense, Amblyomma, Ixodida, Acari, Arthropoda, Metazoa

Not on your lists

comp(13980..14567)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhipicephalus pulchellus RepID=L7LWD5_9ACAR
Uncharacterized protein {ECO:0000313|EMBL:JAC21487.1}; Flags: Fragment;; TaxID=34607 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Amblyomminae; Amblyomma.;" source="Amblyomma cajennense (Cayenne tick).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1989_23
Trichoplax adhaerens, Trichoplax, Placozoa, Metazoa

Not on your lists

comp(14568..14879)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RWP0_TRIAD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDV25163.1}; TaxID=10228 species="Eukaryota; Metazoa; Placozoa; Trichoplax.;" source="Trichoplax adhaerens (Trichoplax reptans).;"
SCNpilot_expt_500_bf_scaffold_1989_24
Drosophila erecta, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(14897..15253)
DNA (357bp) protein (119aa)
GG15592 n=1 Tax=Drosophila erecta RepID=B3NCT9_DROER
GG15592 gene product from transcript GG15592-RA
GG15592 {ECO:0000313|EMBL:EDV51595.1}; TaxID=7220 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.;" source="Drosophila erecta (Fruit fly).;"
SCNpilot_expt_500_bf_scaffold_1989_25
Bombyx mori, Bombyx, Lepidoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(15392..15664)
DNA (273bp) protein (91aa)
Prohibitin protein WPH n=1 Tax=Bombyx mori RepID=Q2F5J2_BOMMO
prohibitin protein WPH
Prohibitin protein WPH {ECO:0000313|EMBL:ABD36375.1}; Uncharacterized protein {ECO:0000313|EnsemblMetazoa:BGIBMGA006158-TA}; TaxID=7091 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx.;" source="Bombyx mori (Silk moth).;"
SCNpilot_expt_500_bf_scaffold_1989_26
Clonorchis sinensis, Clonorchis, Opisthorchiida, Digenea, Platyhelminthes, Metazoa

Not on your lists

comp(15920..16378)
DNA (459bp) protein (153aa)
Prohibitin (Fragment) n=1 Tax=Clonorchis sinensis RepID=G7YXU5_CLOSI
Prohibitin {ECO:0000313|EMBL:GAA57775.1}; Flags: Fragment;; TaxID=79923 species="Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Opisthorchiida; Opisthorchiata; Opisthorchiidae; Clonorchis.;" source="Clonorchis sinensis (Chinese liver fluke).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1989_27
Echinococcus granulosus, Echinococcus, Cyclophyllidea, Eucestoda, Platyhelminthes, Metazoa

Not on your lists

comp(16713..17219)
DNA (507bp) protein (169aa)
Lupus la ribonucleoprotein {ECO:0000313|EMBL:CDS23091.1}; TaxID=6210 species="Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.;" source="Echinococcus granulosus (Hydatid tapeworm).;"
SCNpilot_expt_500_bf_scaffold_1989_28
Anopheles aquasalis, Anopheles, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(17439..17651)
DNA (213bp) protein (71aa)
PREDICTED: la-related protein 1-like n=1 Tax=unknown RepID=UPI0002B4A37B
similar to La-related protein 1
Putative la-related protein {ECO:0000313|EMBL:JAB00767.1}; Flags: Fragment;; TaxID=42839 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles.;" source="Anopheles aquasalis (Malaria mosquito).;"
SCNpilot_expt_500_bf_scaffold_1989_29
unknown

Not on your lists

comp(18011..18520)
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1989_30
unknown

Not on your lists

comp(18881..19063)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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