ggKbase home page

SCNpilot_expt_500_bf_scaffold_9134

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_9134_1
unknown

Not on your lists

2..133
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_9134_2
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1109..2737
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KSU2_9SYNC
Uncharacterized protein {ECO:0000313|EMBL:KJH70051.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
Ricin B lectin
SCNpilot_expt_500_bf_scaffold_9134_3
Ciona intestinalis, Ciona, Enterogona, Ascidiacea, Chordata, Metazoa

Not on your lists

comp(2779..3750)
DNA (972bp) protein (324aa)
PREDICTED: conserved hypothetical protein-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB9586
Uncharacterized protein {ECO:0000313|Ensembl:ENSCINP00000021446}; TaxID=7719 species="Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona.;" source="Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis).;"
similar to GE17229
SCNpilot_expt_500_bf_scaffold_9134_4
Stegodyphus mimosarum, Stegodyphus, Araneae, Arachnida, Arthropoda, Metazoa

Not on your lists

comp(4132..4647)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Rhodnius prolixus RepID=T1IG88_RHOPR
Coiled-coil domain-containing protein 6 {ECO:0000313|EMBL:KFM59782.1}; Flags: Fragment;; TaxID=407821 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Eresoidea; Eresidae; Stegodyphus.;" source="Stegodyphus mimosarum.;"
coiled-coil domain-containing protein 6-like
SCNpilot_expt_500_bf_scaffold_9134_5
Rhodnius prolixus, Rhodnius, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(4644..4871)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhodnius prolixus RepID=R4G4V7_RHOPR
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:RPRC015307-PA}; TaxID=13249 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Reduviidae; Triatominae; Rhodnius.;" source="Rhodnius prolixus (Triatomid bug).;"
similar to coiled-coil domain containing 6; K09288 coiled-coil domain-containing protein 6
SCNpilot_expt_500_bf_scaffold_9134_6
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(4868..5203)
DNA (336bp) protein (112aa)
Coiled-coil domain-containing protein 6 n=1 Tax=Crassostrea gigas RepID=K1QUY9_CRAGI
Coiled-coil domain-containing protein 6 {ECO:0000313|EMBL:EKC40647.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
ccdc6a, ccdc6, fj36e04, wu:fj36e04, zgc:56563, zgc:77435; coiled-coil domain containing 6a; K09288 coiled-coil domain-containing protein 6
SCNpilot_expt_500_bf_scaffold_9134_7
Stegodyphus mimosarum, Stegodyphus, Araneae, Arachnida, Arthropoda, Metazoa

Not on your lists

comp(5263..5460)
DNA (198bp) protein (66aa)
Coiled-coil domain-containing protein 6 {ECO:0000313|EMBL:KFM66835.1}; Flags: Fragment;; TaxID=407821 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Eresoidea; Eresidae; Stegodyphus.;" source="Stegodyphus mimosarum.;"
SCNpilot_expt_500_bf_scaffold_9134_8
unknown

Not on your lists

5548..5760
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_9134_9
Triatoma infestans, Triatoma, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

6051..6341
DNA (291bp) protein (97aa)
Thioredoxin domain-containing protein 4 n=1 Tax=Lepeophtheirus salmonis RepID=C1BVG5_LEPSM
Putative thiol-disulfide isomerase and thioredoxin {ECO:0000313|EMBL:JAC15885.1}; Flags: Fragment;; TaxID=30076 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Reduviidae; Triatominae; Triatoma.;" source="Triatoma infestans (Assassin bug).;"
similar to thioredoxin domain containing 4
SCNpilot_expt_500_bf_scaffold_9134_10
Scleropages formosus, Scleropages, Osteoglossiformes, Neopterygii, Chordata, Metazoa

Not on your lists

7068..7259
DNA (192bp) protein (64aa)
Thioredoxin domain containing 4 (Endoplasmic reticulum) n=1 Tax=Danio rerio RepID=Q6P3G9_DANRE
Endoplasmic reticulum resident protein 44 {ECO:0000313|EMBL:KKX19031.1}; TaxID=113540 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages.;" source="Scleropages formosus (Asian bonytongue).;"
erp44, txndc4, zgc:77883; endoplasmic reticulum protein 44
SCNpilot_expt_500_bf_scaffold_9134_11
Hydra vulgaris, Hydra, Anthoathecata, Hydroidolina, Cnidaria, Metazoa

Not on your lists

7436..7789
DNA (354bp) protein (118aa)
Endoplasmic reticulum resident protein 44 n=1 Tax=Hydra vulgaris RepID=T2M715_HYDVU
similar to predicted protein
Endoplasmic reticulum resident protein 44 {ECO:0000313|EMBL:CDG67710.1}; TaxID=6087 species="Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra.;" source="Hydra vulgaris (Hydra) (Hydra attenuata).;"
SCNpilot_expt_500_bf_scaffold_9134_12
Aplysia californica, Aplysia, Gastropoda, Mollusca, Metazoa

Not on your lists

8005..8358
DNA (354bp) protein (118aa)
RHEB n=1 Tax=Aplysia californica RepID=D5L2Y4_APLCA
RHEB {ECO:0000313|EMBL:ADE58277.1}; TaxID=6500 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Euopisthobranchia; Aplysiomorpha; Aplysioidea; Aplysiidae; Aplysia.;" source="Aplysia californica (California sea hare).;"
GTP-binding protein Rheb-like; K07208 Ras homolog enriched in brain
SCNpilot_expt_500_bf_scaffold_9134_13
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

Not on your lists

8440..8823
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KJE93147.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
Displaying 13 items

View Taxonomy