ggKbase home page

SCNpilot_expt_500_bf_scaffold_5218

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5218_1
unknown

Not on your lists

comp(251..436)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_2
Tetranychus urticae, Tetranychus, Acari, Arthropoda, Metazoa

Not on your lists

874..1185
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Tetranychus urticae RepID=T1L071_TETUR
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:tetur29g01420.1}; TaxID=32264 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus.;" source="Tetranychus urticae (Two-spotted spider mite).;"
SCNpilot_expt_500_bf_scaffold_5218_3
unknown

Not on your lists

1257..2339
DNA (1083bp) protein (361aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_4
unknown

Not on your lists

comp(2543..2824)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_5
Oryzias latipes, Oryzias, Beloniformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(2953..3258)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Oryzias latipes RepID=H2LDL8_ORYLA
uncharacterized LOC101167393
Uncharacterized protein {ECO:0000313|Ensembl:ENSORLP00000004027}; TaxID=8090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias.;" source="Oryzias latipes (Japanese rice fish) (Japanese killifish).;"
SCNpilot_expt_500_bf_scaffold_5218_6
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

Not on your lists

comp(3248..3370)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4AAE8_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO93742.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
SCNpilot_expt_500_bf_scaffold_5218_7
unknown

Not on your lists

comp(3343..3567)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_8
unknown

Not on your lists

comp(3591..3740)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_9
unknown

Not on your lists

comp(3753..4043)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_10
unknown

Not on your lists

4340..4501
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_11
unknown

Not on your lists

comp(5229..5360)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_12
Tupaia chinensis, Tupaia, Scandentia, Mammalia, Chordata, Metazoa

Not on your lists

comp(5645..5791)
DNA (147bp) protein (49aa)
High mobility group protein B1 {ECO:0000313|EMBL:ELW70909.1}; TaxID=246437 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia.;" source="Tupaia chinensis (Chinese tree shrew).;"
SCNpilot_expt_500_bf_scaffold_5218_13
Tribolium castaneum, Tribolium, Coleoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(6017..6469)
DNA (453bp) protein (151aa)
PREDICTED: similar to High mobility group protein DSP1 (Protein dorsal switch 1) n=1 Tax=Tribolium castaneum RepID=UPI00017580F2
similar to High mobility group protein DSP1 (Protein dorsal switch 1); K10802 high mobility group protein B1
Putative uncharacterized protein GLEAN_07692 {ECO:0000313|EMBL:EFA02062.1}; TaxID=7070 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium.;" source="Tribolium castaneum (Red flour beetle).;"
SCNpilot_expt_500_bf_scaffold_5218_14
Loxodonta africana, Loxodonta, Proboscidea, Mammalia, Chordata, Metazoa

Not on your lists

7723..7878
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|Ensembl:ENSLAFP00000016517}; TaxID=9785 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.;" source="Loxodonta africana (African elephant).;"
SCNpilot_expt_500_bf_scaffold_5218_15
Pediculus humanus, Pediculus, Phthiraptera, Neoptera, Arthropoda, Metazoa

Not on your lists

8814..9578
DNA (765bp) protein (255aa)
Pyrroline-5-carboxylate reductase, putative (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
Pyrroline-5-carboxylate reductase {ECO:0000256|RuleBase:RU003903}; EC=1.5.1.2 {ECO:0000256|RuleBase:RU003903};; TaxID=121224 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Phthiraptera; Anoplura; Pediculidae; Pediculus.;" source="Pediculus humanus subsp. corporis (Body louse).;"
Pyrroline-5-carboxylate reductase n=1 Tax=Pediculus humanus subsp. corporis RepID=E0VE13_PEDHC
SCNpilot_expt_500_bf_scaffold_5218_16
Dendroctonus ponderosae, Dendroctonus, Coleoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

9651..10439
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Dendroctonus ponderosae RepID=J3JYY0_DENPD
Uncharacterized protein {ECO:0000313|EMBL:AEE63418.1, ECO:0000313|EnsemblMetazoa:ENN79879}; TaxID=77166 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Scolytinae; Dendroctonus.;" source="Dendroctonus ponderosae (Mountain pine beetle).;"
AGAP004903-PA
SCNpilot_expt_500_bf_scaffold_5218_17
unknown

Not on your lists

comp(11260..11529)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_18
unknown

Not on your lists

comp(12169..12354)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_19
unknown

Not on your lists

comp(12525..12635)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_20
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

Not on your lists

comp(12670..13410)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V3ZZB8_LOTGI rbh
Uncharacterized protein {ECO:0000313|EMBL:ESO89772.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
supt16h; suppressor of Ty 16 homolog (S. cerevisiae) rbh
SCNpilot_expt_500_bf_scaffold_5218_21
Corethrella appendiculata, Corethrella, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(14466..14780)
DNA (315bp) protein (105aa)
PREDICTED: chromatin-specific transcription elongation factor large subunit-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB9EA9
Putative global transcriptional regulator cell division control protein {ECO:0000313|EMBL:JAB59086.1}; TaxID=1370023 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Chaoboridae; Corethrella.;" source="Corethrella appendiculata.;"
similar to CG1828-PA, isoform A
SCNpilot_expt_500_bf_scaffold_5218_22
Rhodnius prolixus, Rhodnius, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(15531..15866)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhodnius prolixus RepID=T1I5C1_RHOPR
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:RPRC011490-PA}; TaxID=13249 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Reduviidae; Triatominae; Rhodnius.;" source="Rhodnius prolixus (Triatomid bug).;"
similar to CG1828-PA, isoform A
SCNpilot_expt_500_bf_scaffold_5218_23
unknown

Not on your lists

comp(15923..16057)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5218_24
unknown

Not on your lists

comp(16039..16221)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 24 items

View Taxonomy