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SCNpilot_expt_500_bf_scaffold_5273

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5273_1
unknown

Not on your lists

comp(2..523)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_2
unknown

Not on your lists

2094..2189
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_3
unknown

Not on your lists

3696..3878
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_4
unknown

Not on your lists

comp(4294..4413)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_5
unknown

Not on your lists

comp(5626..6129)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_6
unknown

Not on your lists

comp(6350..6475)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_7
unknown

Not on your lists

comp(6596..6817)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_8
Pelodiscus sinensis, Pelodiscus, Testudines, Chordata, Metazoa

Not on your lists

comp(7057..7830)
DNA (774bp) protein (258aa)
PREDICTED: WD repeat-containing protein 89 isoform X2 n=1 Tax=Pelodiscus sinensis RepID=UPI0003C4A868
Uncharacterized protein {ECO:0000313|Ensembl:ENSPSIP00000006074}; TaxID=13735 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus.;" source="Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis).;"
WD repeat-containing protein 89-like
SCNpilot_expt_500_bf_scaffold_5273_9
Drosophila grimshawi, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(8038..8445)
DNA (408bp) protein (136aa)
GH22237 n=1 Tax=Drosophila grimshawi RepID=B4K0Z6_DROGR
GH22237 gene product from transcript GH22237-RA
GH22237 {ECO:0000313|EMBL:EDV90850.1}; TaxID=7222 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila.;" source="Drosophila grimshawi (Fruit fly) (Idiomyia grimshawi).;"
SCNpilot_expt_500_bf_scaffold_5273_10
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(8654..8992)
DNA (339bp) protein (113aa)
Ubiquitin carboxyl-terminal hydrolase {ECO:0000256|RuleBase:RU004435}; EC=3.4.19.12 {ECO:0000256|RuleBase:RU004435};; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
PREDICTED: predicted protein-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBAA56
Os01g0177200; Similar to Ubiquitin-specific protease 14.
SCNpilot_expt_500_bf_scaffold_5273_11
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(9005..9217)
DNA (213bp) protein (71aa)
Ubiquitin carboxyl-terminal hydrolase {ECO:0000256|RuleBase:RU004435}; EC=3.4.19.12 {ECO:0000256|RuleBase:RU004435};; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
similar to predicted protein; K11836 ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.1.2.15]
Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Crassostrea gigas RepID=K1QEK7_CRAGI
SCNpilot_expt_500_bf_scaffold_5273_12
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

Not on your lists

comp(9298..11169)
DNA (1872bp) protein (624aa)
Ubiquitin carboxyl-terminal hydrolase {ECO:0000256|RuleBase:RU004435}; EC=3.4.19.12 {ECO:0000256|RuleBase:RU004435};; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
USP5; ubiquitin specific peptidase 5 (isopeptidase T); K11836 ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.1.2.15] rbh
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4AUZ0_LOTGI
SCNpilot_expt_500_bf_scaffold_5273_13
Plasmodium falciparum, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

comp(11333..12049)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Marssonina brunnea f. sp. multigermtubi (strain MB_m1) RepID=K1WXK0_MARBU
Uncharacterized protein {ECO:0000313|EMBL:EWC85584.1}; TaxID=5843 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).;" source="Plasmodium falciparum (isolate NF54).;"
conserved Plasmodium protein, unknown function
SCNpilot_expt_500_bf_scaffold_5273_14
unknown

Not on your lists

comp(13193..13459)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_15
unknown

Not on your lists

comp(13456..13638)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_16
unknown

Not on your lists

comp(13926..14183)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_17
unknown

Not on your lists

comp(14176..14370)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_18
Phanerochaete carnosa, Phanerochaete, Polyporales, Agaricomycetes, Basidiomycota, Fungi

Not on your lists

comp(14419..14877)
DNA (459bp) protein (153aa)
Uncharacterized protein (Fragment) n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) RepID=K5VMQ9_PHACS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKM52743.1}; Flags: Fragment;; TaxID=650164 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Polyporales; Phanerochaetaceae; Phanerochaete.;" source="Phanerochaete carnosa (strain HHB-10118-sp) (White-rot fungus); (Peniophora carnosa).;"
SCNpilot_expt_500_bf_scaffold_5273_19
unknown

Not on your lists

comp(15020..15532)
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_20
unknown

Not on your lists

comp(16564..16887)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_21
unknown

Not on your lists

comp(17637..17912)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_22
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18224..19429)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Saccharomonospora azurea RepID=H8G5L0_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHK86715.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea SZMC 14600.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5273_23
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19444..19854)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IVJ7_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:KJE22403.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5273_24
unknown

Not on your lists

comp(20624..20752)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5273_25
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

comp(21079..21423)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7VJZ7_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU16340.1, ECO:0000313|EnsemblMetazoa:CapteP101979}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
DNA helicase MCM8-like
Displaying 25 items

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