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SCNpilot_expt_500_bf_scaffold_5404

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5404_1
unknown

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148..507
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5404_2
Clonorchis sinensis, Clonorchis, Opisthorchiida, Digenea, Platyhelminthes, Metazoa

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941..1264
DNA (324bp) protein (108aa)
TLC domain-containing protein 2 n=1 Tax=Clonorchis sinensis RepID=G7YB71_CLOSI
TLC domain-containing protein 2 {ECO:0000313|EMBL:GAA50205.1}; TaxID=79923 species="Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Opisthorchiida; Opisthorchiata; Opisthorchiidae; Clonorchis.;" source="Clonorchis sinensis (Chinese liver fluke).;"
transmembrane protein 56
SCNpilot_expt_500_bf_scaffold_5404_3
unknown

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2298..2594
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5404_4
Penicillium brasilianum, Penicillium, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

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2641..4218
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Penicillium oxalicum 114-2 RepID=S8AXA8_PENOX
Uncharacterized protein {ECO:0000313|EMBL:CEJ55098.1}; TaxID=104259 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium.;" source="Penicillium brasilianum.;"
sqpA; hypothetical protein
SCNpilot_expt_500_bf_scaffold_5404_5
unknown

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4423..4914
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5404_6
unknown

Not on your lists

5618..6082
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5404_7
unknown

Not on your lists

6257..6727
DNA (471bp) protein (157aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5404_8
unknown

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comp(7280..7369)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5404_9
unknown

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comp(8105..8212)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5404_10
unknown

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comp(8217..8369)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5404_11
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(9192..9809)
DNA (618bp) protein (206aa)
hypothetical protein ; K00953 FAD synthetase [EC:2.7.7.2]
FAD synthetase n=1 Tax=Crassostrea gigas RepID=K1R7T5_CRAGI
FAD synthetase {ECO:0000313|EMBL:EKC37260.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_5404_12
unknown

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comp(9889..10107)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5404_13
Oryzias latipes, Oryzias, Beloniformes, Neopterygii, Chordata, Metazoa

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comp(10734..10982)
DNA (249bp) protein (83aa)
PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform n=1 Tax=Pseudopodoces humilis RepID=UPI000395D969
serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B {ECO:0000256|RuleBase:RU331113}; TaxID=8090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias.;" source="Oryzias latipes (Japanese rice fish) (Japanese killifish).;"
SCNpilot_expt_500_bf_scaffold_5404_14
Oryzias latipes, Oryzias, Beloniformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(11042..11410)
DNA (369bp) protein (123aa)
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (Fragment) n=1 Tax=Oryzias latipes RepID=H2MA43_ORYLA
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B {ECO:0000256|RuleBase:RU331113}; TaxID=8090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias.;" source="Oryzias latipes (Japanese rice fish) (Japanese killifish).;"
serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
SCNpilot_expt_500_bf_scaffold_5404_15
Ephemerella inconstans, Ephemerella, Ephemeroptera, Palaeoptera, Arthropoda, Metazoa

Not on your lists

comp(11407..11553)
DNA (147bp) protein (49aa)
PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform-like n=1 Tax=Strongylocentrotus purpuratus RepID=UPI00026523D1
ppp2r2c; protein phosphatase 2, regulatory subunit B, gamma; K04354 protein phosphatase 2 (formerly 2A), regulatory subunit B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B {ECO:0000256|RuleBase:RU331113}; Flags: Fragment;; TaxID=681538 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Palaeoptera; Ephemeroptera; Pannota; Ephemerellidae; Ephemerella.;" source="Ephemerella inconstans.;"
SCNpilot_expt_500_bf_scaffold_5404_16
Libinia emarginata, Libinia, Decapoda, Eumalacostraca, Arthropoda, Metazoa

Not on your lists

comp(11978..12361)
DNA (384bp) protein (128aa)
ppp2r2b, MGC145161, ppp2r2c; protein phosphatase 2, regulatory subunit B, beta (EC:3.1.3.16); K04354 protein phosphatase 2 (formerly 2A), regulatory subunit B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B n=2 Tax=Heterotremata RepID=I3RJJ3_SCYPA
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B {ECO:0000256|RuleBase:RU331113}; Flags: Fragment;; TaxID=6807 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Brachyura; Eubrachyura; Majoidea; Majidae; Libinia.;" source="Libinia emarginata (Portly spider crab).;"
SCNpilot_expt_500_bf_scaffold_5404_17
Anolis carolinensis, Anolis, Squamata, Chordata, Metazoa

Not on your lists

14678..15346
DNA (669bp) protein (223aa)
ubiquitin thioesterase ZRANB1-like; K11862 ubiquitin thioesterase ZRANB1 [EC:3.1.2.-]
PREDICTED: ubiquitin thioesterase ZRANB1 isoform X2 n=1 Tax=Chrysemys picta bellii RepID=UPI000388C590
Uncharacterized protein {ECO:0000313|Ensembl:ENSACAP00000014249}; TaxID=28377 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Iguanidae; Polychrotinae; Anolis.;" source="Anolis carolinensis (Green anole) (American chameleon).;"
SCNpilot_expt_500_bf_scaffold_5404_18
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

15585..16646
DNA (1062bp) protein (354aa)
similar to LOC495328 protein; K11862 ubiquitin thioesterase ZRANB1 [EC:3.1.2.-]
PREDICTED: ubiquitin thioesterase zranb1-B-like isoform X2 n=1 Tax=Aplysia californica RepID=UPI0003596A00
Uncharacterized protein {ECO:0000313|EMBL:ELU04077.1, ECO:0000313|EnsemblMetazoa:CapteP178164}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
Displaying 18 items

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