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SCNpilot_expt_500_bf_scaffold_3243

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3243_1
unknown

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358..693
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_2
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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comp(1011..1271)
DNA (261bp) protein (87aa)
PREDICTED: uncharacterized transporter C38C10.2-like n=1 Tax=Aplysia californica RepID=UPI0003598507
Uncharacterized protein {ECO:0000313|EMBL:ESO85638.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
sialin
SCNpilot_expt_500_bf_scaffold_3243_3
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

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comp(1451..1771)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7UX60_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU10872.1, ECO:0000313|EnsemblMetazoa:CapteP113983}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
slc17a5, sb:cb809, zgc:153077; solute carrier family 17 (anion/sugar transporter), member 5; K12301 MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 5
SCNpilot_expt_500_bf_scaffold_3243_4
Musca domestica, Musca, Diptera, Neoptera, Arthropoda, Metazoa

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comp(1834..2007)
DNA (174bp) protein (58aa)
PREDICTED: sialin-like isoform X1 n=1 Tax=Musca domestica RepID=UPI0003C3923B
Major Facilitator Superfamily protein {ECO:0000313|EMBL:AFP60236.1}; TaxID=7370 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Musca.;" source="Musca domestica (House fly).;"
similar to membrane glycoprotein SP55; K12301 MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 5
SCNpilot_expt_500_bf_scaffold_3243_5
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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3448..3981
DNA (534bp) protein (178aa)
Zinc finger C4H2 domain-containing protein n=1 Tax=Crassostrea gigas RepID=K1R4G0_CRAGI
Zinc finger C4H2 domain-containing protein {ECO:0000313|EMBL:EKC40643.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_3243_6
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

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4218..4517
DNA (300bp) protein (100aa)
Proteasome subunit alpha type {ECO:0000256|RuleBase:RU000551}; EC=3.4.25.1 {ECO:0000256|RuleBase:RU000551};; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
Pros29; proteasome 29kD subunit; K02728 20S proteasome subunit alpha 3 [EC:3.4.25.1]
Proteasome subunit alpha type n=1 Tax=Hordeum vulgare var. distichum RepID=F2E049_HORVD
SCNpilot_expt_500_bf_scaffold_3243_7
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

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4682..5065
DNA (384bp) protein (128aa)
Proteasome subunit alpha type {ECO:0000256|RuleBase:RU000551}; EC=3.4.25.1 {ECO:0000256|RuleBase:RU000551};; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
Proteasome subunit alpha type n=1 Tax=Hordeum vulgare var. distichum RepID=F2E049_HORVD
proteasome subunit alpha type-4-like
SCNpilot_expt_500_bf_scaffold_3243_8
R_OD1_Yanofskybacteria_42_49, Yanofskybacteria, Parcubacteria, Bacteria

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comp(5180..5374)
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_42_49_curated
SCNpilot_expt_500_bf_scaffold_3243_9
Trichoplax adhaerens, Trichoplax, Placozoa, Metazoa

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comp(6278..6937)
DNA (660bp) protein (220aa)
UPI0003D06F82 related cluster n=1 Tax=unknown RepID=UPI0003D06F82
hypothetical protein ; K02355 elongation factor G
Putative uncharacterized protein {ECO:0000313|EMBL:EDV26476.1}; Flags: Fragment;; TaxID=10228 species="Eukaryota; Metazoa; Placozoa; Trichoplax.;" source="Trichoplax adhaerens (Trichoplax reptans).;"
SCNpilot_expt_500_bf_scaffold_3243_10
Acyrthosiphon pisum, Acyrthosiphon, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(7194..7418)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Acyrthosiphon pisum RepID=J9JKG8_ACYPI
uncharacterized LOC100159274; K02355 elongation factor G
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:ACYPI000663-PA}; TaxID=7029 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon.;" source="Acyrthosiphon pisum (Pea aphid).;"
SCNpilot_expt_500_bf_scaffold_3243_11
unknown

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comp(7729..8214)
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_12
Lepeophtheirus salmonis, Lepeophtheirus, Siphonostomatoida, Copepoda, Arthropoda, Metazoa

Not on your lists

comp(8215..8445)
DNA (231bp) protein (77aa)
PREDICTED: chromobox protein homolog 3-like isoform 1 n=1 Tax=Metaseiulus occidentalis RepID=UPI0002657C29
Chromobox protein homolog 1 {ECO:0000313|EMBL:ADD38294.1}; TaxID=72036 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Maxillopoda; Copepoda; Siphonostomatoida; Caligidae; Lepeophtheirus.;" source="Lepeophtheirus salmonis (Salmon louse).;"
heterochromatin protein 1-like
SCNpilot_expt_500_bf_scaffold_3243_13
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

comp(8535..8891)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7TP62_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELT95454.1, ECO:0000313|EnsemblMetazoa:CapteP119855}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
hypothetical protein; K14715 solute carrier family 39 (zinc transporter), member 9
SCNpilot_expt_500_bf_scaffold_3243_14
Poecilia formosa, Poecilia, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(8932..9456)
DNA (525bp) protein (175aa)
Zinc transporter ZIP9-like protein n=1 Tax=Crotalus horridus RepID=T1D6T0_CROHD
Uncharacterized protein {ECO:0000313|Ensembl:ENSPFOP00000018083}; TaxID=48698 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia.;" source="Poecilia formosa (Amazon molly) (Limia formosa).;"
zinc transporter ZIP9-like
SCNpilot_expt_500_bf_scaffold_3243_15
unknown

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comp(9444..9602)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_16
unknown

Not on your lists

9994..10605
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_17
unknown

Not on your lists

10673..10975
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_18
unknown

Not on your lists

11088..11543
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_19
unknown

Not on your lists

11579..11791
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_20
unknown

Not on your lists

11749..11895
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_21
unknown

Not on your lists

11892..12149
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_22
unknown

Not on your lists

12222..12386
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_23
unknown

Not on your lists

12394..12615
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_24
unknown

Not on your lists

12623..12868
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3243_25
unknown

Not on your lists

12855..13085
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying 25 items

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