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SCNpilot_expt_500_bf_scaffold_3270

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3270_1
Oncorhynchus mykiss, Oncorhynchus, Salmoniformes, Neopterygii, Chordata, Metazoa

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comp(396..671)
DNA (276bp) protein (92aa)
Uncharacterized protein (Fragment) n=1 Tax=Gasterosteus aculeatus RepID=G3PR61_GASAC
Oncorhynchus mykiss genomic scaffold, scaffold_188 {ECO:0000313|EMBL:CDQ63962.1}; TaxID=8022 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.;" source="Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).;"
zgc:112183; K07914 Ras-related protein Rab-37
SCNpilot_expt_500_bf_scaffold_3270_2
unknown

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746..1090
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3270_3
Hydra vulgaris, Hydra, Anthoathecata, Hydroidolina, Cnidaria, Metazoa

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comp(1072..1242)
DNA (171bp) protein (57aa)
PREDICTED: ras-related protein Rab-26-like n=1 Tax=unknown RepID=UPI0002B46DA9
similar to Ras-related protein Rab-26
Ras-related protein Rab-37 {ECO:0000313|EMBL:CDG68220.1}; TaxID=6087 species="Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra.;" source="Hydra vulgaris (Hydra) (Hydra attenuata).;"
SCNpilot_expt_500_bf_scaffold_3270_4
Astyanax mexicanus, Astyanax, Characiformes, Neopterygii, Chordata, Metazoa

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3668..4297
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3J1A4_STRPU
Uncharacterized protein {ECO:0000313|Ensembl:ENSAMXP00000020359}; TaxID=7994 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Characidae incertae sedis; Astyanax clade; Astyanax.;" source="Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus).;"
similar to conserved hypothetical protein
SCNpilot_expt_500_bf_scaffold_3270_5
unknown

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4657..5355
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3270_6
unknown

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5404..5955
DNA (552bp) protein (184aa)
Tak1; TGF-beta activated kinase 1; K04427 mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25]
SCNpilot_expt_500_bf_scaffold_3270_7
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

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6228..6773
DNA (546bp) protein (182aa)
Ste20p {ECO:0000313|EMBL:EXX66399.1}; TaxID=1432141 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis DAOM 197198w.;"
SCNpilot_expt_500_bf_scaffold_3270_8
Danio rerio, Danio, Cypriniformes, Neopterygii, Chordata, Metazoa

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7034..7612
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Danio rerio RepID=F1QGE4_DANRE
protein kinase Npk
Uncharacterized protein {ECO:0000313|Ensembl:ENSDARP00000125869}; TaxID=7955 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio.;" source="Danio rerio (Zebrafish) (Brachydanio rerio).;"
SCNpilot_expt_500_bf_scaffold_3270_9
unknown

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8333..8539
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3270_10
Rhipicephalus pulchellus, Rhipicephalus, Ixodida, Acari, Arthropoda, Metazoa

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8751..8933
DNA (183bp) protein (61aa)
Putative pre-mrna cleavage complex 2 protein pcf11 n=1 Tax=Rhipicephalus pulchellus RepID=L7LXP4_9ACAR
Putative pre-mrna cleavage complex 2 protein pcf11 {ECO:0000313|EMBL:JAA56550.1}; TaxID=72859 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus.;" source="Rhipicephalus pulchellus.;"
SCNpilot_expt_500_bf_scaffold_3270_11
unknown

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9080..9760
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3270_12
unknown

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9819..10358
DNA (540bp) protein (180aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3270_13
Anopheles darlingi, Anopheles, Diptera, Neoptera, Arthropoda, Metazoa

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10348..10503
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Anopheles darlingi RepID=E3WJ39_ANODA
Uncharacterized protein {ECO:0000313|EMBL:ETN59707.1, ECO:0000313|EnsemblMetazoa:ADAC008678-PA}; TaxID=43151 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles.;" source="Anopheles darlingi (Mosquito).;"
AGAP001271-PB; K14400 pre-mRNA cleavage complex 2 protein Pcf11
SCNpilot_expt_500_bf_scaffold_3270_14
unknown

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10649..10960
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3270_15
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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11858..12904
DNA (1047bp) protein (349aa)
Kelch domain protein-like protein n=1 Tax=Adineta vaga RepID=B3G4D7_ADIVA
kelch domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
SCNpilot_expt_500_bf_scaffold_3270_16
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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15296..15565
DNA (270bp) protein (90aa)
Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea RepID=V4AM57_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO94691.1}; Flags: Fragment;; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
similar to CG8098-PB, isoform B
SCNpilot_expt_500_bf_scaffold_3270_17
unknown

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15918..16100
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3270_18
unknown

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comp(16613..17032)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3270_19
unknown

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comp(17146..17835)
DNA (690bp) protein (230aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3270_20
unknown

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comp(18331..18492)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3270_21
Loxodonta africana, Loxodonta, Proboscidea, Mammalia, Chordata, Metazoa

Not on your lists

comp(18686..18907)
DNA (222bp) protein (74aa)
Uncharacterized protein (Fragment) n=1 Tax=Loxodonta africana RepID=G3U9N3_LOXAF
Uncharacterized protein {ECO:0000313|Ensembl:ENSLAFP00000024541}; Flags: Fragment;; TaxID=9785 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta.;" source="Loxodonta africana (African elephant).;"
MTSS1; metastasis suppressor 1
SCNpilot_expt_500_bf_scaffold_3270_22
Macaca mulatta, Macaca, Primates, Mammalia, Chordata, Metazoa

Not on your lists

comp(19013..19378)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Macaca mulatta RepID=F6S5G4_MACMU
MTSS1; metastasis suppressor 1
Uncharacterized protein {ECO:0000313|Ensembl:ENSMMUP00000020331}; TaxID=9544 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.;" source="Macaca mulatta (Rhesus macaque).;"
Displaying 22 items

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