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SCNpilot_expt_500_bf_scaffold_3410

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3410_1
unknown

Not on your lists

2..154
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_2
unknown

Not on your lists

2615..3223
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_3
unknown

Not on your lists

3268..3804
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_4
unknown

Not on your lists

comp(4477..4842)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_5
unknown

Not on your lists

comp(5235..5501)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_6
Ciona intestinalis, Ciona, Enterogona, Ascidiacea, Chordata, Metazoa

Not on your lists

6208..6420
DNA (213bp) protein (71aa)
Protofilament ribbon protein n=1 Tax=Ciona intestinalis RepID=Q8T886_CIOIN
pf-rib, Ci-pf-rib; protofilament ribbon protein
Protofilament ribbon protein {ECO:0000313|EMBL:BAB85853.1}; Uncharacterized protein {ECO:0000313|Ensembl:ENSCINP00000004415}; TaxID=7719 species="Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona.;" source="Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis).;"
SCNpilot_expt_500_bf_scaffold_3410_7
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

6474..6722
DNA (249bp) protein (83aa)
RIB43A-like with coiled-coils protein 2 {ECO:0000313|EMBL:EKC29387.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_3410_8
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

6916..7095
DNA (180bp) protein (60aa)
RIB43A-like with coiled-coils protein 2 n=1 Tax=Crassostrea gigas RepID=K1PYT4_CRAGI
RIB43A-like with coiled-coils protein 2 {ECO:0000313|EMBL:EKC29387.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_3410_9
Tyto alba, Tyto, Strigiformes, Aves, Chordata, Metazoa

Not on your lists

7214..7417
DNA (204bp) protein (68aa)
PREDICTED: RIB43A-like with coiled-coils protein 2 n=1 Tax=Melopsittacus undulatus RepID=UPI0003833481
RIB43A-like with coiled-coils protein 2 {ECO:0000313|EMBL:KFV54808.1}; Flags: Fragment;; TaxID=56313 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Strigiformes; Tytonidae; Tyto.;" source="Tyto alba (Barn owl).;"
RIBC2, MGC133859; RIB43A domain with coiled-coils 2
SCNpilot_expt_500_bf_scaffold_3410_10
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

7490..7666
DNA (177bp) protein (59aa)
PREDICTED: RIB43A-like with coiled-coils protein 2-like n=1 Tax=Aplysia californica RepID=UPI000359671E
hypothetical protein
RIB43A-like with coiled-coils protein 2 {ECO:0000313|EMBL:EKC29387.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_3410_11
Dendroctonus ponderosae, Dendroctonus, Coleoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

8099..9100
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Dendroctonus ponderosae RepID=U4U5C8_DENPD
Uncharacterized protein {ECO:0000313|EMBL:ERL85801.1}; TaxID=77166 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Scolytinae; Dendroctonus.;" source="Dendroctonus ponderosae (Mountain pine beetle).;"
rxrgb, zgc:92183; retinoid X receptor, gamma b; K08526 retinoid X receptor gamma
SCNpilot_expt_500_bf_scaffold_3410_12
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

Not on your lists

comp(9138..9578)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4B0W5_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESP00906.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
surfeit locus protein 4-like
SCNpilot_expt_500_bf_scaffold_3410_13
unknown

Not on your lists

comp(9792..10307)
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_14
unknown

Not on your lists

comp(10424..10660)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_15
Culex quinquefasciatus, Culex, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

10859..11119
DNA (261bp) protein (87aa)
lysine-specific histone demethylase 1; K11450 lysine-specific histone demethylase 1 [EC:1.-.-.-]
Lysine-specific histone demethylase 1 n=1 Tax=Culex quinquefasciatus RepID=B0W582_CULQU
Lysine-specific histone demethylase 1 {ECO:0000313|EMBL:EDS34829.1}; TaxID=7176 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex.;" source="Culex quinquefasciatus (Southern house mosquito) (Culex pungens).;"
SCNpilot_expt_500_bf_scaffold_3410_16
Oryctolagus cuniculus, Oryctolagus, Lagomorpha, Mammalia, Chordata, Metazoa

Not on your lists

11198..11692
DNA (495bp) protein (165aa)
Uncharacterized protein (Fragment) n=1 Tax=Oryctolagus cuniculus RepID=G1SEW1_RABIT
KDM1A; lysine (K)-specific demethylase 1A
Uncharacterized protein {ECO:0000313|Ensembl:ENSOCUP00000001013}; Flags: Fragment;; TaxID=9986 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus.;" source="Oryctolagus cuniculus (Rabbit).;"
SCNpilot_expt_500_bf_scaffold_3410_17
Triatoma infestans, Triatoma, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

11867..12136
DNA (270bp) protein (90aa)
similar to KIAA0601 protein; K11450 lysine-specific histone demethylase 1 [EC:1.-.-.-]
Putative uncharacterized protein (Fragment) n=1 Tax=Acropora millepora RepID=G8HTA9_ACRMI
Putative lysine-specific histone demethylase 1 {ECO:0000313|EMBL:JAC16143.1}; TaxID=30076 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Reduviidae; Triatominae; Triatoma.;" source="Triatoma infestans (Assassin bug).;"
SCNpilot_expt_500_bf_scaffold_3410_18
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

Not on your lists

12139..12357
DNA (219bp) protein (73aa)
Amine oxidase, flavincontaining superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8H020_ACACA
amine oxidase, flavincontaining superfamily protein
Amine oxidase, flavincontaining superfamily protein {ECO:0000313|EMBL:ELR17721.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
SCNpilot_expt_500_bf_scaffold_3410_19
Drosophila pseudoobscura, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

12395..12811
DNA (417bp) protein (139aa)
GL25121 gene product from transcript GL25121-RA; K11450 lysine-specific histone demethylase 1 [EC:1.-.-.-]
GA14350 {ECO:0000313|EMBL:EAL30809.2}; EC=1.-.-.- {ECO:0000313|EMBL:EAL30809.2};; TaxID=46245 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.;" source="Drosophila pseudoobscura pseudoobscura (Fruit fly).;"
GE19651 n=1 Tax=Drosophila yakuba RepID=B4PFD1_DROYA
SCNpilot_expt_500_bf_scaffold_3410_20
Hydra vulgaris, Hydra, Anthoathecata, Hydroidolina, Cnidaria, Metazoa

Not on your lists

12778..12984
DNA (207bp) protein (69aa)
similar to amine oxidase (flavin containing) domain 2; K11450 lysine-specific histone demethylase 1 [EC:1.-.-.-]
Lysine-specific histone demethylase 1A n=1 Tax=Hydra vulgaris RepID=T2MHY7_HYDVU
Lysine-specific histone demethylase 1A {ECO:0000313|EMBL:CDG71893.1}; TaxID=6087 species="Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra.;" source="Hydra vulgaris (Hydra) (Hydra attenuata).;"
SCNpilot_expt_500_bf_scaffold_3410_21
unknown

Not on your lists

13166..13486
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_22
unknown

Not on your lists

13802..14161
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_23
unknown

Not on your lists

14225..14401
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_24
unknown

Not on your lists

14476..14769
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_25
unknown

Not on your lists

14968..15156
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3410_26
unknown

Not on your lists

15580..15894
DNA (315bp) protein (105aa)

This feature has no annotations

Displaying 26 items

View Taxonomy