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SCNpilot_expt_500_bf_scaffold_3867

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3867_1
unknown

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2..367
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_2
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

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comp(445..1101)
DNA (657bp) protein (219aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2DFB6_HORVD
Predicted protein {ECO:0000313|EMBL:BAJ93787.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
Alpha(1,3)-fucosyltransferase 11, putative
SCNpilot_expt_500_bf_scaffold_3867_3
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

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comp(1176..1889)
DNA (714bp) protein (238aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2DFB6_HORVD
Predicted protein {ECO:0000313|EMBL:BAJ93787.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_3867_4
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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2545..2685
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:ESP03137.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
SCNpilot_expt_500_bf_scaffold_3867_5
Esox lucius, Esox, Esociformes, Neopterygii, Chordata, Metazoa

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2721..2942
DNA (222bp) protein (74aa)
OSCP1 n=1 Tax=Esox lucius RepID=C1BZQ6_ESOLU
OSCP1 {ECO:0000313|EMBL:ACO14509.1}; TaxID=8010 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox.;" source="Esox lucius (Northern pike).;"
oxidored-nitro domain-containing protein isoform, putative
SCNpilot_expt_500_bf_scaffold_3867_6
unknown

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2942..3103
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_7
unknown

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3260..3400
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_8
unknown

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3739..3891
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_9
unknown

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comp(4491..4859)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_10
unknown

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comp(5157..5411)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_11
unknown

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comp(5430..5927)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_12
unknown

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comp(6324..6470)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_13
Pelodiscus sinensis, Pelodiscus, Testudines, Chordata, Metazoa

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6594..7061
DNA (468bp) protein (156aa)
PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 1 n=1 Tax=Zonotrichia albicollis RepID=UPI000393F20E
similar to Glycerophosphodiester phosphodiesterase domain-containing protein 1
Uncharacterized protein {ECO:0000313|Ensembl:ENSPSIP00000012222}; TaxID=13735 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus.;" source="Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis).;"
SCNpilot_expt_500_bf_scaffold_3867_14
unknown

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8197..8505
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_15
Acyrthosiphon pisum, Acyrthosiphon, Hemiptera, Neoptera, Arthropoda, Metazoa

Not on your lists

9144..9287
DNA (144bp) protein (48aa)
trifunctional enzyme subunit alpha, mitochondrial-like; K07515 enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.211]
PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like n=1 Tax=Acyrthosiphon pisum RepID=UPI0002062058
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:ACYPI006589-PA}; TaxID=7029 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon.;" source="Acyrthosiphon pisum (Pea aphid).;"
SCNpilot_expt_500_bf_scaffold_3867_16
unknown

Not on your lists

9454..9705
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_17
unknown

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9900..10172
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_18
Hydra vulgaris, Hydra, Anthoathecata, Hydroidolina, Cnidaria, Metazoa

Not on your lists

10531..11091
DNA (561bp) protein (187aa)
similar to hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase, alpha subunit; K07515 enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.211]
Trifunctional enzyme subunit alpha, mitochondrial (Fragment) n=2 Tax=Hydra vulgaris RepID=T2MGB4_HYDVU
Trifunctional enzyme subunit alpha, mitochondrial {ECO:0000313|EMBL:CDG70997.1}; Flags: Fragment;; TaxID=6087 species="Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra.;" source="Hydra vulgaris (Hydra) (Hydra attenuata).;"
SCNpilot_expt_500_bf_scaffold_3867_19
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

comp(11378..11914)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7VF52_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU17488.1, ECO:0000313|EnsemblMetazoa:CapteP228357}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3867_20
Echinococcus granulosus, Echinococcus, Cyclophyllidea, Eucestoda, Platyhelminthes, Metazoa

Not on your lists

comp(12134..12478)
DNA (345bp) protein (115aa)
Gamma aminobutyric acid receptor subunit n=1 Tax=Echinococcus granulosus RepID=U6J1M3_ECHGR
Gamma-aminobutyric acid receptor subunit gamma-3 {ECO:0000313|EMBL:EUB64429.1}; TaxID=6210 species="Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.;" source="Echinococcus granulosus (Hydatid tapeworm).;"
histone H4
SCNpilot_expt_500_bf_scaffold_3867_21
unknown

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comp(12701..12970)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3867_22
unknown

Not on your lists

13409..13600
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 22 items

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