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SCNpilot_expt_500_bf_scaffold_3980

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3980_1
unknown

Not on your lists

comp(627..782)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3980_2
unknown

Not on your lists

1232..1330
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3980_3
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

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1840..2139
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZDQ1_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN48857.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_3980_4
Trichoplax adhaerens, Trichoplax, Placozoa, Metazoa

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2171..2497
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RTZ8_TRIAD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDV26223.1}; TaxID=10228 species="Eukaryota; Metazoa; Placozoa; Trichoplax.;" source="Trichoplax adhaerens (Trichoplax reptans).;"
SCNpilot_expt_500_bf_scaffold_3980_5
Aptenodytes forsteri, Aptenodytes, Sphenisciformes, Aves, Chordata, Metazoa

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2801..3247
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Anas platyrhynchos RepID=U3IXH2_ANAPL
EF-hand domain-containing family member C2 {ECO:0000313|EMBL:KFM10066.1}; Flags: Fragment;; TaxID=9233 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Aptenodytes.;" source="Aptenodytes forsteri (Emperor penguin).;"
EFHC2; EF-hand domain (C-terminal) containing 2
SCNpilot_expt_500_bf_scaffold_3980_6
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

3491..4129
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZDQ1_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN48857.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_3980_7
unknown

Not on your lists

4330..4611
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3980_8
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

5042..5401
DNA (360bp) protein (120aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3YDQ7_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN61526.1}; Flags: Fragment;; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_3980_9
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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5531..5800
DNA (270bp) protein (90aa)
Meiosis-specific nuclear structural protein 1 n=2 Tax=Crassostrea gigas RepID=K1PMF9_CRAGI
Meiosis-specific nuclear structural protein 1 {ECO:0000313|EMBL:EKC17640.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
similar to meiosis-specific nuclear structural protein 1
SCNpilot_expt_500_bf_scaffold_3980_10
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

5857..6324
DNA (468bp) protein (156aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3YDQ7_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN61526.1}; Flags: Fragment;; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_3980_11
Latimeria chalumnae, Latimeria, Coelacanthiformes, Chordata, Metazoa

Not on your lists

6362..6571
DNA (210bp) protein (70aa)
Uncharacterized protein (Fragment) n=2 Tax=Latimeria chalumnae RepID=H3B903_LATCH
Uncharacterized protein {ECO:0000313|Ensembl:ENSLACP00000018374}; TaxID=7897 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria.;" source="Latimeria chalumnae (West Indian ocean coelacanth).;"
mns1; meiosis-specific nuclear structural 1
SCNpilot_expt_500_bf_scaffold_3980_12
unknown

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comp(6858..7115)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3980_13
Latimeria chalumnae, Latimeria, Coelacanthiformes, Chordata, Metazoa

Not on your lists

comp(8112..8522)
DNA (411bp) protein (137aa)
PREDICTED: LOW QUALITY PROTEIN: serine incorporator 3 n=1 Tax=Latimeria chalumnae RepID=UPI0003C13E5F
Uncharacterized protein {ECO:0000313|Ensembl:ENSLACP00000016113}; TaxID=7897 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria.;" source="Latimeria chalumnae (West Indian ocean coelacanth).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3980_14
unknown

Not on your lists

comp(9542..9727)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3980_15
Nestor notabilis, Nestor, Psittaciformes, Aves, Chordata, Metazoa

Not on your lists

10148..10483
DNA (336bp) protein (112aa)
PREDICTED: Arg8-vasotocin receptor-like n=1 Tax=Melopsittacus undulatus RepID=UPI0003834847
[Arg8]-vasotocin receptor {ECO:0000313|EMBL:KFQ47244.1}; TaxID=176057 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Nestor.;" source="Nestor notabilis (Kea).;"
Arg8-vasotocin receptor-like
SCNpilot_expt_500_bf_scaffold_3980_16
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

Not on your lists

10592..11470
DNA (879bp) protein (293aa)
Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea RepID=V3ZDH2_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO82082.1}; Flags: Fragment;; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
Arg8-vasotocin receptor-like
SCNpilot_expt_500_bf_scaffold_3980_17
unknown

Not on your lists

12390..12545
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3980_18
unknown

Not on your lists

12496..12750
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3980_19
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

comp(13146..13985)
DNA (840bp) protein (280aa)
PREDICTED: LysM, putative peptidoglycan-binding, domain containing 3-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB954B
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN57648.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_3980_20
unknown

Not on your lists

17331..17504
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3980_21
unknown

Not on your lists

17646..17783
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3980_22
unknown

Not on your lists

17992..18207
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3980_23
Daphnia pulex, Daphnia, Diplostraca, Phyllopoda, Arthropoda, Metazoa

Not on your lists


18332..18583
DNA (252bp) protein (84aa)
60S ribosomal protein L18 n=1 Tax=Daphnia pulex RepID=E9HR88_DAPPU
60S ribosomal protein L18 {ECO:0000256|RuleBase:RU000573}; TaxID=6669 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.;" source="Daphnia pulex (Water flea).;"
hypothetical protein; K02883 large subunit ribosomal protein L18e
Displaying 23 items

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