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SCNpilot_expt_500_bf_scaffold_4855

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4855_1
Trypanosoma brucei, Trypanosoma, Kinetoplastida, Eukaryota

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3..500
DNA (498bp) protein (166aa)
trypanothione synthetase (EC:6.3.1.9); K01833 trypanothione synthetase/amidase [EC:6.3.1.9 3.5.1.-]
Trypanothione synthetase, putative {ECO:0000313|EMBL:CBH09500.1}; EC=6.3.1.9 {ECO:0000313|EMBL:CBH09500.1};; TaxID=679716 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma.;" source="Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972).;"
Trypanothione synthetase, putative n=2 Tax=Trypanosoma brucei RepID=C9ZJE1_TRYB9
SCNpilot_expt_500_bf_scaffold_4855_2
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

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comp(707..1582)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Helobdella robusta RepID=T1FVH5_HELRO
Uncharacterized protein {ECO:0000313|EMBL:ESN93729.1, ECO:0000313|EnsemblMetazoa:HelroP193935}; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella.;" source="Helobdella robusta (Californian leech).;"
RING1 and YY1-binding protein B-like
SCNpilot_expt_500_bf_scaffold_4855_3
unknown

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comp(1690..1875)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4855_4
Boiga irregularis, Boiga, Squamata, Chordata, Metazoa

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comp(3473..4285)
DNA (813bp) protein (271aa)
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_03162}; EC=2.1.1.205 {ECO:0000256|HAMAP-Rule:MF_03162};; 2'-O-ribose RNA methyltransferase TRM7 homolog {ECO:0000256|HAMAP-Rule:MF_03162}; TaxID=92519 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Boiga.;" source="Boiga irregularis (Brown tree snake).;"
ftsj1, fb17g12, wu:fb17g12, zgc:101831; FtsJ homolog 1 (E. coli) (EC:2.1.1.-); K14864 tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
Putative ribosomal RNA methyltransferase 1 (Fragment) n=1 Tax=Ophiophagus hannah RepID=V8P6T7_OPHHA
SCNpilot_expt_500_bf_scaffold_4855_5
Acyrthosiphon pisum, Acyrthosiphon, Hemiptera, Neoptera, Arthropoda, Metazoa

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comp(4245..4409)
DNA (165bp) protein (55aa)
putative ribosomal RNA methyltransferase C4F10.03c-like; K14864 tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_03162}; EC=2.1.1.205 {ECO:0000256|HAMAP-Rule:MF_03162};; 2'-O-ribose RNA methyltransferase TRM7 homolog {ECO:0000256|HAMAP-Rule:MF_03162}; TaxID=7029 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon.;" source="Acyrthosiphon pisum (Pea aphid).;"
ACYPI009233 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WVU3_ACYPI
SCNpilot_expt_500_bf_scaffold_4855_6
Ceratitis capitata, Ceratitis, Diptera, Neoptera, Arthropoda, Metazoa

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comp(4490..4885)
DNA (396bp) protein (132aa)
PREDICTED: microfibrillar-associated protein 1-like n=1 Tax=Ceratitis capitata RepID=UPI00032994A3
Microfibrillar-associated protein 1 {ECO:0000313|EMBL:JAC01900.1}; TaxID=7213 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Ceratitis; Ceratitis.;" source="Ceratitis capitata (Mediterranean fruit fly) (Tephritis capitata).;"
GD13659 gene product from transcript GD13659-RA; K13110 microfibrillar-associated protein 1
SCNpilot_expt_500_bf_scaffold_4855_7
Apis mellifera, Apis, Hymenoptera, Neoptera, Arthropoda, Metazoa

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comp(4975..5142)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Apis mellifera RepID=H9K9J2_APIME
Mfap1; microfibril-associated protein 1; K13110 microfibrillar-associated protein 1
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:GB48955-PA}; TaxID=7460 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis.;" source="Apis mellifera (Honeybee).;"
SCNpilot_expt_500_bf_scaffold_4855_8
unknown

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comp(5501..5974)
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4855_9
unknown

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comp(6067..6201)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4855_10
Coelastrella oocystiformis, Coelastrella, Sphaeropleales, Chlorophyceae, Chlorophyta, Viridiplantae

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6394..6660
DNA (267bp) protein (89aa)
Beta-carotene ketolase n=1 Tax=Coelastrella oocystiformis RepID=G3F5K3_9CHLO
Beta-carotene ketolase {ECO:0000313|EMBL:AEM45622.1}; TaxID=75804 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Scenedesmaceae; Coelastrella.;" source="Coelastrella oocystiformis.;"
cbk1; beta-carotene ketolase
SCNpilot_expt_500_bf_scaffold_4855_11
Chromochloris zofingiensis, Chromochloris, Sphaeropleales, Chlorophyceae, Chlorophyta, Viridiplantae

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6742..7200
DNA (459bp) protein (153aa)
Beta-carotene ketolase/oxygenase n=1 Tax=Chromochloris zofingiensis RepID=Q5U931_9CHLO
Beta-carotene ketolase/oxygenase {ECO:0000313|EMBL:AAV41372.1}; TaxID=31302 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris.;" source="Chromochloris zofingiensis.;"
CBK1; beta-carotene ketolase
SCNpilot_expt_500_bf_scaffold_4855_12
unknown

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comp(7474..8016)
DNA (543bp) protein (181aa)

This feature has no annotations

Displaying 12 items

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