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SCNpilot_expt_500_bf_scaffold_4916

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4916_1
unknown

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comp(393..743)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4916_2
Dendroctonus ponderosae, Dendroctonus, Coleoptera, Neoptera, Arthropoda, Metazoa

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comp(740..1063)
DNA (324bp) protein (108aa)
similar to CG7479-PA; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Uncharacterized protein (Fragment) n=1 Tax=Dendroctonus ponderosae RepID=N6SWU6_DENPD
Uncharacterized protein {ECO:0000313|EMBL:ENN72264.1, ECO:0000313|EnsemblMetazoa:ENN72264}; Flags: Fragment;; TaxID=77166 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Scolytinae; Dendroctonus.;" source="Dendroctonus ponderosae (Mountain pine beetle).;"
SCNpilot_expt_500_bf_scaffold_4916_3
Drosophila erecta, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

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comp(1154..1393)
DNA (240bp) protein (80aa)
GG15248 gene product from transcript GG15248-RA; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
GG15248 n=1 Tax=Drosophila erecta RepID=B3NG68_DROER
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_500_bf_scaffold_4916_2].
GG15248 {ECO:0000313|EMBL:EDV50969.1}; TaxID=7220 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.;" source="Drosophila erecta (Fruit fly).;"
SCNpilot_expt_500_bf_scaffold_4916_4
Apis mellifera, Apis, Hymenoptera, Neoptera, Arthropoda, Metazoa

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comp(1551..1814)
DNA (264bp) protein (88aa)
LARS2; leucyl-tRNA synthetase 2, mitochondrial; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Uncharacterized protein n=1 Tax=Apis mellifera RepID=H9KND4_APIME
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:GB54109-PA}; TaxID=7460 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis.;" source="Apis mellifera (Honeybee).;"
SCNpilot_expt_500_bf_scaffold_4916_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2438..2797)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI00036DACA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETK34208.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
SCNpilot_expt_500_bf_scaffold_4916_6
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2907..3602)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Alishewanella jeotgali KCTC 22429 RepID=H3ZFR9_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EHR40553.1}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella jeotgali KCTC 22429.;"
SCNpilot_expt_500_bf_scaffold_4916_7
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3626..3964)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Acinetobacter gerneri RepID=N8ZH66_9GAMM
Sortase {ECO:0000313|EMBL:AJW78075.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
sortase-sorted surface-anchored protein
SCNpilot_expt_500_bf_scaffold_4916_8
Acyrthosiphon pisum, Acyrthosiphon, Hemiptera, Neoptera, Arthropoda, Metazoa

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comp(4233..4523)
DNA (291bp) protein (97aa)
LARS2; leucyl-tRNA synthetase 2, mitochondrial; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucyl-tRNA synthetase, putative n=1 Tax=Pediculus humanus subsp. corporis RepID=E0V9Y3_PEDHC
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:ACYPI38061-PA}; TaxID=7029 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon.;" source="Acyrthosiphon pisum (Pea aphid).;"
SCNpilot_expt_500_bf_scaffold_4916_9
Caenorhabditis remanei, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(4846..4986)
DNA (141bp) protein (47aa)
protein ZK524.3; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
CRE-LARS-2 protein n=1 Tax=Caenorhabditis remanei RepID=E3N7P5_CAERE
Suspect SCG annotation. See neighboring gene [SCNpilot_expt_500_bf_scaffold_4916_8].
CRE-LARS-2 protein {ECO:0000313|EMBL:EFO89079.1}; TaxID=31234 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis remanei (Caenorhabditis vulgaris).;"
SCNpilot_expt_500_bf_scaffold_4916_10
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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comp(5443..5775)
DNA (333bp) protein (111aa)
hypothetical protein ; K00621 glucosamine-phosphate N-acetyltransferase [EC:2.3.1.4]
Sphingolipid delta(4)-desaturase DES1 n=1 Tax=Crassostrea gigas RepID=K1QTQ9_CRAGI
Sphingolipid delta(4)-desaturase DES1 {ECO:0000313|EMBL:EKC40212.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
Displaying 10 items

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