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SCNpilot_expt_500_bf_scaffold_2048

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2048_1
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

Not on your lists

comp(1..471)
DNA (471bp) protein (157aa)
PREDICTED: dynein heavy chain 6, axonemal-like, partial n=1 Tax=unknown RepID=UPI0002B47AB2
dynein heavy chain 6, axonemal-like
Uncharacterized protein {ECO:0000313|EMBL:ESN90843.1, ECO:0000313|EnsemblMetazoa:HelroP194633}; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella.;" source="Helobdella robusta (Californian leech).;"
SCNpilot_expt_500_bf_scaffold_2048_2
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(632..2317)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=2 Tax=Strongylocentrotus purpuratus RepID=H3HTC0_STRPU
similar to SI:zC220F6.1 (novel protein similar to human dynein heavy chain (DHC))
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_004934-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
SCNpilot_expt_500_bf_scaffold_2048_3
Oryctolagus cuniculus, Oryctolagus, Lagomorpha, Mammalia, Chordata, Metazoa

Not on your lists

comp(2380..2565)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Oryctolagus cuniculus RepID=G1SYH9_RABIT
Uncharacterized protein {ECO:0000313|Ensembl:ENSOCUP00000008673}; TaxID=9986 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus.;" source="Oryctolagus cuniculus (Rabbit).;"
Dnahc6, Dnah6, axo_a; dynein, axonemal, heavy chain 6
SCNpilot_expt_500_bf_scaffold_2048_4
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(2784..4940)
DNA (2157bp) protein (719aa)
PREDICTED: dynein heavy chain 6, axonemal n=1 Tax=Trichechus manatus latirostris RepID=UPI0002C45049 rbh
Dynein heavy chain 6, axonemal {ECO:0000313|EMBL:EKC31674.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
DNAH6; dynein, axonemal, heavy chain 6 rbh
SCNpilot_expt_500_bf_scaffold_2048_5
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(5161..6204)
DNA (1044bp) protein (348aa)
PREDICTED: dynein, axonemal, heavy polypeptide 6-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBDA1
similar to dynein heavy chain rbh
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_016225-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
SCNpilot_expt_500_bf_scaffold_2048_6
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

comp(6418..6618)
DNA (201bp) protein (67aa)
Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta RepID=R7VE83_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU14606.1, ECO:0000313|EnsemblMetazoa:CapteP134108}; Flags: Fragment;; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
SCNpilot_expt_500_bf_scaffold_2048_7
Myotis davidii, Myotis, Chiroptera, Mammalia, Chordata, Metazoa

Not on your lists

comp(6670..6861)
DNA (192bp) protein (64aa)
Dynein heavy chain 6, axonemal n=1 Tax=Myotis davidii RepID=L5LVE5_MYODS
DNAH6; dynein, axonemal, heavy chain 6
Dynein heavy chain 6, axonemal {ECO:0000313|EMBL:ELK30056.1}; TaxID=225400 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis.;" source="Myotis davidii (David's myotis).;"
SCNpilot_expt_500_bf_scaffold_2048_8
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(7019..7342)
DNA (324bp) protein (108aa)
PREDICTED: dynein heavy chain 6, axonemal, partial n=1 Tax=Ciona intestinalis RepID=UPI000180B9CE
dnah6; dynein, axonemal, heavy chain 6
Dynein heavy chain 6, axonemal {ECO:0000313|EMBL:EKC31674.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_2048_9
unknown

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comp(7370..7588)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_10
unknown

Not on your lists

comp(7912..8010)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_11
unknown

Not on your lists

comp(8240..8638)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_12
unknown

Not on your lists

comp(8689..9057)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_13
unknown

Not on your lists

comp(10104..10502)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10837..11007)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000367DEAB
Uncharacterized protein {ECO:0000313|EMBL:KGJ89706.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio psychroerythus).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2048_15
Pseudoalteromonas spongiae, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11412..11915)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000371B3B6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERG53990.1}; TaxID=1117319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas spongiae UST010723-006.;"
SCNpilot_expt_500_bf_scaffold_2048_16
Leptospira sp. B5-022, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11863..12072)
DNA (210bp) protein (70aa)
PF05960 family protein n=1 Tax=Leptospira sp. B5-022 RepID=M6DCR7_9LEPT
PF05960 family protein {ECO:0000313|EMBL:EMK00422.1}; TaxID=1242992 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira sp. B5-022.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2048_17
unknown

Not on your lists

comp(12480..12707)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_18
unknown

Not on your lists

13892..14392
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_19
unknown

Not on your lists

14862..14975
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_20
unknown

Not on your lists

15302..15631
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_21
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

16206..16571
DNA (366bp) protein (122aa)
ATP-binding cassette sub-family A member 1 n=1 Tax=Crassostrea gigas RepID=K1PG28_CRAGI
ATP-binding cassette sub-family A member 1 {ECO:0000313|EMBL:EKC20528.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
ATP-binding cassette sub-family A member 2-like
SCNpilot_expt_500_bf_scaffold_2048_22
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

16629..16832
DNA (204bp) protein (68aa)
Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VNY1_NAEGR
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EFC41498.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
SCNpilot_expt_500_bf_scaffold_2048_23
unknown

Not on your lists

16834..17193
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_24
unknown

Not on your lists

17538..17918
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_25
unknown

Not on your lists

18540..19094
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_26
Mus musculus, Mus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

19204..19518
DNA (315bp) protein (105aa)
Protein Abca16 n=1 Tax=Mus musculus RepID=E9QAF2_MOUSE
Protein Abca16 {ECO:0000313|Ensembl:ENSMUSP00000112736}; TaxID=10090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.;" source="Mus musculus (Mouse).;"
Abca16, RGD1563534; ATP-binding cassette, subfamily A (ABC1), member 16
SCNpilot_expt_500_bf_scaffold_2048_27
Ciona intestinalis, Ciona, Enterogona, Ascidiacea, Chordata, Metazoa

Not on your lists

19719..19961
DNA (243bp) protein (81aa)
PREDICTED: ATP-binding cassette sub-family A member 3-like n=1 Tax=Amphimedon queenslandica RepID=UPI00021A52D4
ATP-binding cassette sub-family A member 3-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSCINP00000011521}; TaxID=7719 species="Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona.;" source="Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis).;"
SCNpilot_expt_500_bf_scaffold_2048_28
unknown

Not on your lists

19921..20079
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_29
unknown

Not on your lists

comp(20155..20394)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2048_30
unknown

Not on your lists

comp(20682..20909)
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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