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SCNpilot_expt_500_bf_scaffold_2131

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2131_1
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(2..409)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1F8R0_AMPQE
Uncharacterized protein {ECO:0000313|EMBL:EYC34173.1}; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma ceylanicum.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2131_2

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comp(520..840)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V3ZFP7_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:KKK45067.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2131_3
unknown

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980..1213
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_4
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

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comp(1421..3205)
DNA (1785bp) protein (595aa)
PREDICTED: conserved oligomeric Golgi complex subunit 8 n=1 Tax=Echinops telfairi RepID=UPI000333AC75 rbh
Uncharacterized protein {ECO:0000313|EMBL:CEK69377.1}; Flags: Fragment;; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupulmonata; Stylommatophora; Sigmurethra; Arionoidea; Arionidae; Arion.;" source="Arion vulgaris.;"
COG8; component of oligomeric golgi complex 8 rbh
SCNpilot_expt_500_bf_scaffold_2131_5
unknown

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comp(3272..3664)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_6
unknown

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comp(3677..4132)
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_7
unknown

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comp(4143..4553)
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_8
Scleropages formosus, Scleropages, Osteoglossiformes, Neopterygii, Chordata, Metazoa

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comp(4567..5160)
DNA (594bp) protein (198aa)
PREDICTED: NAD(P)H-hydrate epimerase n=1 Tax=Xenopus tropicalis RepID=UPI0003500C5E
NAD(P)H-hydrate epimerase-like {ECO:0000313|EMBL:KKX16861.1}; TaxID=113540 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages.;" source="Scleropages formosus (Asian bonytongue).;"
apolipoprotein A-I-binding protein-like
SCNpilot_expt_500_bf_scaffold_2131_9
unknown

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comp(5343..6002)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_10
Oncorhynchus mykiss, Oncorhynchus, Salmoniformes, Neopterygii, Chordata, Metazoa

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comp(6003..6593)
DNA (591bp) protein (197aa)
PREDICTED: REST corepressor 3 isoform X2 n=1 Tax=Danio rerio RepID=UPI00005484A1
Oncorhynchus mykiss genomic scaffold, scaffold_24 {ECO:0000313|EMBL:CDQ57601.1}; TaxID=8022 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.;" source="Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).;"
similar to KIAA1343 protein
SCNpilot_expt_500_bf_scaffold_2131_11
unknown

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7759..8136
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_12
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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8114..9355
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V3ZPK5_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO82786.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
pyruvate dehydrogenase
SCNpilot_expt_500_bf_scaffold_2131_13
unknown

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comp(9606..10109)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_14
unknown

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comp(10205..10501)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_15
unknown

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comp(10617..10814)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_16
unknown

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10850..10972
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_17
unknown

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11058..11714
DNA (657bp) protein (219aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_18
unknown

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11823..12413
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_19
unknown

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comp(12679..12927)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_20
unknown

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comp(13062..13235)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_21
unknown

Not on your lists

13256..13552
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_22
unknown

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comp(13474..13890)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_23
unknown

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comp(14171..14491)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_24
unknown

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comp(14594..14944)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_25
Xiphophorus maculatus, Xiphophorus, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

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comp(15298..16194)
DNA (897bp) protein (299aa)
PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X1 n=2 Tax=Latimeria chalumnae RepID=UPI0003C15DAF
CAP-Gly domain-containing linker protein 1-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSXMAP00000017638}; TaxID=8083 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus.;" source="Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).;"
SCNpilot_expt_500_bf_scaffold_2131_26
unknown

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comp(16481..16711)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_27
Carassius gibelio, Carassius, Cypriniformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(17639..17872)
DNA (234bp) protein (78aa)
Receptor protein serine/threonine kinase {ECO:0000256|SAAS:SAAS00138132}; EC=2.7.11.30 {ECO:0000256|SAAS:SAAS00138132};; Flags: Fragment;; TaxID=101364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Carassius.;" source="Carassius gibelio (silver crucian carp).;"
tgfbr1a, tgfbr1, zgc:123263; transforming growth factor, beta receptor 1 a (EC:2.7.11.1); K04674 TGF-beta receptor type-1 [EC:2.7.11.30]
Transforming growth factor beta receptor 1a (Fragment) n=1 Tax=Carassius gibelio RepID=K7PNN3_9TELE
SCNpilot_expt_500_bf_scaffold_2131_28
Tetranychus urticae, Tetranychus, Acari, Arthropoda, Metazoa

Not on your lists

comp(17881..18159)
DNA (279bp) protein (93aa)
Receptor protein serine/threonine kinase {ECO:0000256|SAAS:SAAS00138132}; EC=2.7.11.30 {ECO:0000256|SAAS:SAAS00138132};; TaxID=32264 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus.;" source="Tetranychus urticae (Two-spotted spider mite).;"
PREDICTED: LOW QUALITY PROTEIN: TGF-beta receptor type-1-like n=1 Tax=Metaseiulus occidentalis RepID=UPI0002657323
GI20087 gene product from transcript GI20087-RA; K13569 TGF-beta receptor, invertebrate
SCNpilot_expt_500_bf_scaffold_2131_29
unknown

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comp(18494..19009)
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2131_30
unknown

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comp(18993..19349)
DNA (357bp) protein (119aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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