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SCNpilot_expt_500_bf_scaffold_2383

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2383_1
Hydra vulgaris, Hydra, Anthoathecata, Hydroidolina, Cnidaria, Metazoa

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694..1020
DNA (327bp) protein (109aa)
26S proteasome non-ATPase regulatory subunit 7 n=1 Tax=Hydra vulgaris RepID=T2MFU6_HYDVU
similar to 26S proteasome non-ATPase regulatory subunit 7
26S proteasome non-ATPase regulatory subunit 7 {ECO:0000313|EMBL:CDG70785.1}; TaxID=6087 species="Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra.;" source="Hydra vulgaris (Hydra) (Hydra attenuata).;"
SCNpilot_expt_500_bf_scaffold_2383_2
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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1519..1977
DNA (459bp) protein (153aa)
26S proteasome non-ATPase regulatory subunit 7 n=1 Tax=Crassostrea gigas RepID=K1Q9Z6_CRAGI
Uncharacterized protein {ECO:0000313|EMBL:ESO91076.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
PSMD7; proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
SCNpilot_expt_500_bf_scaffold_2383_3
unknown

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2102..2272
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_4
unknown

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3036..3539
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_5
unknown

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4025..4240
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_6
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

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4460..5086
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7TN43_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELT94942.1, ECO:0000313|EnsemblMetazoa:CapteP6286}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
abcb9, si:dkey-21k4.3; ATP-binding cassette, sub-family B (MDR/TAP), member 9; K05656 ATP-binding cassette, subfamily B (MDR/TAP), member 9
SCNpilot_expt_500_bf_scaffold_2383_7
Latimeria chalumnae, Latimeria, Coelacanthiformes, Chordata, Metazoa

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5110..5523
DNA (414bp) protein (138aa)
PREDICTED: ATP-binding cassette sub-family B member 9 n=1 Tax=Latimeria chalumnae RepID=UPI0003C16A14
Uncharacterized protein {ECO:0000313|Ensembl:ENSLACP00000020226}; TaxID=7897 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria.;" source="Latimeria chalumnae (West Indian ocean coelacanth).;"
abcb9; ATP-binding cassette, sub-family B (MDR/TAP), member 9; K05656 ATP-binding cassette, subfamily B (MDR/TAP), member 9
SCNpilot_expt_500_bf_scaffold_2383_8
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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6706..6969
DNA (264bp) protein (88aa)
Bifunctional polynucleotide phosphatase/kinase n=1 Tax=Crassostrea gigas RepID=K1R6K9_CRAGI
Bifunctional polynucleotide phosphatase/kinase {ECO:0000313|EMBL:EKC39184.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_2383_9
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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7076..7336
DNA (261bp) protein (87aa)
Bifunctional polynucleotide phosphatase/kinase n=1 Tax=Crassostrea gigas RepID=K1R6K9_CRAGI
Bifunctional polynucleotide phosphatase/kinase {ECO:0000313|EMBL:EKC39184.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
bifunctional polynucleotide phosphatase/kinase-like
SCNpilot_expt_500_bf_scaffold_2383_10
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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8108..8362
DNA (255bp) protein (85aa)
Bifunctional polynucleotide phosphatase/kinase n=1 Tax=Crassostrea gigas RepID=K1R6K9_CRAGI
Bifunctional polynucleotide phosphatase/kinase {ECO:0000313|EMBL:EKC39184.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
DNA 3'phosphatase
SCNpilot_expt_500_bf_scaffold_2383_11
unknown

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8827..9045
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_12
unknown

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10699..10860
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_13
unknown

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11240..11491
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_14
Larimichthys crocea, Larimichthys, Neopterygii, Chordata, Metazoa

Not on your lists

12178..12471
DNA (294bp) protein (98aa)
PREDICTED: electroneutral sodium bicarbonate exchanger 1-like n=1 Tax=Metaseiulus occidentalis RepID=UPI00026580D4
Sodium bicarbonate cotransporter 3 {ECO:0000313|EMBL:KKF32807.1}; TaxID=215358 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys.;" source="Larimichthys crocea (Large yellow croaker) (Pseudosciaena crocea).;"
sodium bicarbonate cotransporter 3-like
SCNpilot_expt_500_bf_scaffold_2383_15
Doryteuthis pealeii, Doryteuthis, Teuthida, Coleoidea, Mollusca, Metazoa

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12682..12993
DNA (312bp) protein (104aa)
Na-dependent Cl/HCO3 exchanger n=1 Tax=Doryteuthis pealeii RepID=Q8I8G6_DORPE
Anion exchange protein {ECO:0000256|RuleBase:RU362035}; TaxID=1051067 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Neocoleoidea; Decapodiformes; Teuthida; Myopsina; Loliginidae; Doryteuthis.;" source="Doryteuthis pealeii (Longfin inshore squid) (Loligo pealeii).;"
similar to solute carrier family 4, sodium bicarbonate cotransporter, member 7
SCNpilot_expt_500_bf_scaffold_2383_16
unknown

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13348..13554
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_17
Doryteuthis pealeii, Doryteuthis, Teuthida, Coleoidea, Mollusca, Metazoa

Not on your lists

14169..14813
DNA (645bp) protein (215aa)
Na-dependent Cl/HCO3 exchanger n=1 Tax=Doryteuthis pealeii RepID=Q8I8G6_DORPE
Anion exchange protein {ECO:0000256|RuleBase:RU362035}; TaxID=1051067 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Neocoleoidea; Decapodiformes; Teuthida; Myopsina; Loliginidae; Doryteuthis.;" source="Doryteuthis pealeii (Longfin inshore squid) (Loligo pealeii).;"
sodium bicarbonate cotransporter (nbc2 3) ; K13861 solute carrier family 4 (sodium bicarbonate transporter), member 10
SCNpilot_expt_500_bf_scaffold_2383_18
unknown

Not on your lists

14825..14977
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_19
unknown

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comp(15696..15935)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_20
unknown

Not on your lists

comp(16062..16211)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_21
unknown

Not on your lists

comp(17218..17664)
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_22
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

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comp(18076..20361)
DNA (2286bp) protein (762aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E0D0_HORVD
Predicted protein {ECO:0000313|EMBL:BAK00802.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
hypothetical protein; K14290 exportin-1
SCNpilot_expt_500_bf_scaffold_2383_23
unknown

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20698..20832
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_24
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

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comp(20780..21025)
DNA (246bp) protein (82aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E0D0_HORVD
Predicted protein {ECO:0000313|EMBL:BAK00802.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
Exportin, putative; K14290 exportin-1
SCNpilot_expt_500_bf_scaffold_2383_25
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

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comp(21073..21348)
DNA (276bp) protein (92aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E0D0_HORVD
Predicted protein {ECO:0000313|EMBL:BAK00802.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
Exportin, putative; K14290 exportin-1
SCNpilot_expt_500_bf_scaffold_2383_26
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

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comp(21424..21546)
DNA (123bp) protein (41aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E0D0_HORVD
Predicted protein {ECO:0000313|EMBL:BAK00802.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_2383_27
unknown

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comp(21830..22015)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_28
Triticum aestivum, Triticum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

22500..22688
DNA (189bp) protein (63aa)
casein kinase II subunit alpha'-like; K03097 casein kinase II subunit alpha [EC:2.7.11.1]
Uncharacterized protein (Fragment) n=1 Tax=Ophiophagus hannah RepID=V8NUH4_OPHHA
Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_2BL_71ED6B5BD.2}; TaxID=4565 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum.;" source="Triticum aestivum (Wheat).;"
SCNpilot_expt_500_bf_scaffold_2383_29
unknown

Not on your lists

22711..22911
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2383_30
Tetraodon nigroviridis, Tetraodon, Tetraodontiformes, Neopterygii, Chordata, Metazoa

Not on your lists

23681..23983
DNA (303bp) protein (101aa)
mitogen-activated protein kinase ERK-A, putative (EC:2.7.11.23); K03097 casein kinase II subunit alpha [EC:2.7.11.1]
PREDICTED: casein kinase II subunit alpha-like isoform X2 n=1 Tax=Maylandia zebra RepID=UPI00032A2DA2
Chromosome 8 SCAF15044, whole genome shotgun sequence {ECO:0000313|EMBL:CAG12041.1}; Flags: Fragment;; TaxID=99883 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Tetraodon.;" source="Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon; nigroviridis).;"
Displaying 30 items

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