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SCNpilot_expt_500_bf_scaffold_2485

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2485_1
Phytophthora parasitica, Phytophthora, Peronosporales, Eukaryota

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comp(241..795)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Phytophthora parasitica P1569 RepID=V9FER7_PHYPR
Uncharacterized protein {ECO:0000313|EMBL:ETI49940.1}; TaxID=1317065 species="Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora.;" source="Phytophthora parasitica P1569.;"
3-hydroxyisobutyrate dehydrogenase, putative
SCNpilot_expt_500_bf_scaffold_2485_2
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

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comp(797..1213)
DNA (417bp) protein (139aa)
Predicted protein n=2 Tax=Naegleria gruberi RepID=D2VYJ6_NAEGR
3-hydroxyisobutyrate dehydrogenase
Predicted protein {ECO:0000313|EMBL:EFC38124.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
SCNpilot_expt_500_bf_scaffold_2485_3
unknown

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1818..1940
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2485_4
unknown

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comp(2076..2246)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2485_5
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

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comp(2296..2760)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Crassostrea gigas RepID=K1R362_CRAGI
Uncharacterized protein {ECO:0000313|EMBL:EKC28301.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
similar to CG17912-PA
SCNpilot_expt_500_bf_scaffold_2485_6
unknown

Not on your lists

3595..3822
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2485_7
unknown

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3871..4077
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2485_8
Drosophila willistoni, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

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comp(4154..4264)
DNA (111bp) protein (37aa)
GK20289 {ECO:0000313|EMBL:EDW76808.1}; Flags: Fragment;; TaxID=7260 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.;" source="Drosophila willistoni (Fruit fly).;"
SCNpilot_expt_500_bf_scaffold_2485_9
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

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comp(4323..4565)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Z7V3_BRAFL
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEN51458.1}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_2485_10
Drosophila mojavensis, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

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comp(5183..5581)
DNA (399bp) protein (133aa)
GI13950 gene product from transcript GI13950-RA; K13524 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22]
GI13950 n=1 Tax=Drosophila mojavensis RepID=B4KXQ2_DROMO
GI13950 {ECO:0000313|EMBL:EDW19759.1}; TaxID=7230 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila.;" source="Drosophila mojavensis (Fruit fly).;"
SCNpilot_expt_500_bf_scaffold_2485_11
Apis cerana, Apis, Hymenoptera, Neoptera, Arthropoda, Metazoa

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comp(6649..7836)
DNA (1188bp) protein (396aa)
PREDICTED: neuronal calcium sensor 2-like n=1 Tax=Nasonia vitripennis RepID=UPI000224747A
neuronal calcium sensor 2-like
Neuronal calcium sensor 2 {ECO:0000313|EMBL:AEY60787.1}; TaxID=7461 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apis.;" source="Apis cerana (Indian honeybee).;"
SCNpilot_expt_500_bf_scaffold_2485_12
unknown

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comp(8399..8791)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2485_13
Strigamia maritima, Strigamia, Geophilomorpha, Pleurostigmophora, Arthropoda, Metazoa

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comp(9281..9745)
DNA (465bp) protein (155aa)
CERK; ceramide kinase; K04715 ceramide kinase [EC:2.7.1.138]
Uncharacterized protein n=1 Tax=Strigamia maritima RepID=T1IWA5_STRMM
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SMAR005470-PA}; TaxID=126957 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda; Pleurostigmophora; Geophilomorpha; Linotaeniidae; Strigamia.;" source="Strigamia maritima (European centipede) (Geophilus maritimus).;"
SCNpilot_expt_500_bf_scaffold_2485_14
unknown

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comp(9830..10462)
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2485_15
unknown

Not on your lists

11143..11445
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2485_16
unknown

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11472..11744
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2485_17
unknown

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11886..12047
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2485_18
unknown

Not on your lists

12110..12283
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2485_19
unknown

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12303..12593
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2485_20
Oreochromis niloticus, Oreochromis, Cichliformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(12969..13274)
DNA (306bp) protein (102aa)
PREDICTED: NFX1-type zinc finger-containing protein 1-like n=1 Tax=Pundamilia nyererei RepID=UPI0003AFF01E
NFX1-type zinc finger-containing protein 1-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSONIP00000008592}; TaxID=8128 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis.;" source="Oreochromis niloticus (Nile tilapia) (Tilapia nilotica).;"
SCNpilot_expt_500_bf_scaffold_2485_21
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(13430..13957)
DNA (528bp) protein (176aa)
NFX1-type zinc finger-containing protein 1 n=1 Tax=Crassostrea gigas RepID=K1RYN2_CRAGI
NFX1-type zinc finger-containing protein 1 {ECO:0000313|EMBL:EKC40141.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
SCNpilot_expt_500_bf_scaffold_2485_22
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(14210..14830)
DNA (621bp) protein (207aa)
PREDICTED: Upf1-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB97E6
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_020828-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
similar to KIAA1404 protein
SCNpilot_expt_500_bf_scaffold_2485_23
Stegodyphus mimosarum, Stegodyphus, Araneae, Arachnida, Arthropoda, Metazoa

Not on your lists

comp(15077..15316)
DNA (240bp) protein (80aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3ZBZ2_BRAFL
NFX1-type zinc finger-containing protein 1 {ECO:0000313|EMBL:KFM67868.1}; Flags: Fragment;; TaxID=407821 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Eresoidea; Eresidae; Stegodyphus.;" source="Stegodyphus mimosarum.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2485_24
Acyrthosiphon pisum, Acyrthosiphon, Hemiptera, Neoptera, Arthropoda, Metazoa

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comp(15313..15690)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Acyrthosiphon pisum RepID=J9JWW3_ACYPI
NFX1-type zinc finger-containing protein 1-like
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:ACYPI004888-PA}; TaxID=7029 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon.;" source="Acyrthosiphon pisum (Pea aphid).;"
SCNpilot_expt_500_bf_scaffold_2485_25
Lepisosteus oculatus, Lepisosteus, Semionotiformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(15994..17061)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3ZBZ0_BRAFL
Uncharacterized protein {ECO:0000313|Ensembl:ENSLOCP00000016771}; TaxID=7918 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus.;" source="Lepisosteus oculatus (Spotted gar).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2485_26
Cuculus canorus, Cuculus, Cuculiformes, Aves, Chordata, Metazoa

Not on your lists

comp(17123..17908)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4ANR5_LOTGI
NFX1-type zinc finger-containing protein 1 {ECO:0000313|EMBL:KFO74299.1}; Flags: Fragment;; TaxID=55661 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus.;" source="Cuculus canorus (common cuckoo).;"
ZNFX1; zinc finger, NFX1-type containing 1
SCNpilot_expt_500_bf_scaffold_2485_27
Haemonchus contortus, Haemonchus, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(17980..18273)
DNA (294bp) protein (98aa)
Major sperm protein domain containing protein (Fragment) n=1 Tax=Haemonchus contortus RepID=U6PDM2_HAECO
Major sperm protein domain containing protein {ECO:0000313|EMBL:CDJ91589.1}; Flags: Fragment;; TaxID=6289 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Haemonchidae; Haemonchinae; Haemonchus.;" source="Haemonchus contortus (Barber pole worm).;"
Displaying 27 items

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