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SCNpilot_expt_500_bf_scaffold_2626

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2626_1
unknown

Not on your lists

comp(159..374)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_2
unknown

Not on your lists

comp(448..708)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_3
Astyanax mexicanus, Astyanax, Characiformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(986..1273)
DNA (288bp) protein (96aa)
Gamma-aminobutyric acid B receptor 1 (Fragment) n=1 Tax=Carassius auratus RepID=Q4VSR3_CARAU
Uncharacterized protein {ECO:0000313|Ensembl:ENSAMXP00000011938}; TaxID=7994 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Characidae incertae sedis; Astyanax clade; Astyanax.;" source="Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus).;"
gabbr1a, gabbr1; gamma-aminobutyric acid (GABA) B receptor, 1a; K04615 gamma-aminobutyric acid type B receptor
SCNpilot_expt_500_bf_scaffold_2626_4
Scleropages formosus, Scleropages, Osteoglossiformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(1348..1623)
DNA (276bp) protein (92aa)
Gamma-aminobutyric acid type B receptor subunit 1-like {ECO:0000313|EMBL:KKX10877.1}; TaxID=113540 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages.;" source="Scleropages formosus (Asian bonytongue).;"
SCNpilot_expt_500_bf_scaffold_2626_5
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

comp(1665..1970)
DNA (306bp) protein (102aa)
PREDICTED: gamma-aminobutyric acid type B receptor subunit 1-like n=1 Tax=Metaseiulus occidentalis RepID=UPI0002658AE0
Uncharacterized protein {ECO:0000313|EMBL:ELT91514.1, ECO:0000313|EnsemblMetazoa:CapteP107055}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
GABBR1; gamma-aminobutyric acid (GABA) B receptor, 1; K04615 gamma-aminobutyric acid type B receptor
SCNpilot_expt_500_bf_scaffold_2626_6
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

comp(2017..2235)
DNA (219bp) protein (73aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EEN52307.1}; Flags: Fragment;; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_2626_7
unknown

Not on your lists

2644..3081
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_8
unknown

Not on your lists

comp(4072..4353)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_9
unknown

Not on your lists

comp(4443..4664)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_10
unknown

Not on your lists

comp(6307..6462)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_11
unknown

Not on your lists

6838..7068
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_12
Aedes aegypti, Aedes, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

9133..9870
DNA (738bp) protein (246aa)
AAEL005507-PA n=1 Tax=Aedes aegypti RepID=Q179V1_AEDAE
inhibitory pou; K09366 POU domain transcription factor, class 4
POU domain protein {ECO:0000256|RuleBase:RU361194}; TaxID=7159 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia.;" source="Aedes aegypti (Yellowfever mosquito) (Culex aegypti).;"
SCNpilot_expt_500_bf_scaffold_2626_13
unknown

Not on your lists

10463..10762
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_14
unknown

Not on your lists

comp(11784..11969)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_15
unknown

Not on your lists

comp(12039..12347)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_16
unknown

Not on your lists

comp(12384..12533)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_17
unknown

Not on your lists

comp(12508..12798)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_18
unknown

Not on your lists

comp(13420..13602)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2626_19
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists


14299..14700
DNA (402bp) protein (134aa)
60S ribosomal protein L13 n=1 Tax=Branchiostoma floridae RepID=C3YFH5_BRAFL
hypothetical protein; K02873 large subunit ribosomal protein L13e
60S ribosomal protein L13 {ECO:0000256|RuleBase:RU000572}; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_2626_20
Nephasoma pellucidum, Nephasoma, Golfingiida, Sipuncula, Annelida, Metazoa

Not on your lists


14697..14990
DNA (294bp) protein (98aa)
Ribosomal protein l13 (Fragment) n=1 Tax=Nephasoma pellucidum RepID=S6CNG0_9ANNE
Ribosomal protein l13 {ECO:0000313|EMBL:CCD27765.1}; Flags: Fragment;; TaxID=360536 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Sipuncula; Sipunculidea; Golfingiida; Golfingiidae; Nephasoma.;" source="Nephasoma pellucidum.;"
similar to RPL13 protein; K02873 large subunit ribosomal protein L13e
SCNpilot_expt_500_bf_scaffold_2626_21
Monodelphis domestica, Monodelphis, Didelphimorphia, Mammalia, Chordata, Metazoa

Not on your lists

comp(15160..15627)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Monodelphis domestica RepID=F7GJV3_MONDO
Bbs7, 8430406N16Rik; Bardet-Biedl syndrome 7 (human)
Uncharacterized protein {ECO:0000313|Ensembl:ENSMODP00000023616}; TaxID=13616 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis.;" source="Monodelphis domestica (Gray short-tailed opossum).;"
SCNpilot_expt_500_bf_scaffold_2626_22
Mus musculus, Mus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

comp(15736..15900)
DNA (165bp) protein (55aa)
Bardet-Biedl syndrome 7 n=1 Tax=Mus musculus RepID=B1ATV6_MOUSE
Bbs7, 8430406N16Rik; Bardet-Biedl syndrome 7 (human)
Bardet-Biedl syndrome 7 protein homolog {ECO:0000313|Ensembl:ENSMUSP00000103790}; TaxID=10090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.;" source="Mus musculus (Mouse).;"
SCNpilot_expt_500_bf_scaffold_2626_23
Oryzias latipes, Oryzias, Beloniformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(15962..16153)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Oryzias latipes RepID=H2N0J6_ORYLA
Bardet-Biedl syndrome 7 protein-like
Uncharacterized protein {ECO:0000313|Ensembl:ENSORLP00000024907}; TaxID=8090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias.;" source="Oryzias latipes (Japanese rice fish) (Japanese killifish).;"
SCNpilot_expt_500_bf_scaffold_2626_24
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(16195..16536)
DNA (342bp) protein (114aa)
PREDICTED: Bardet-Biedl syndrome 7 protein homolog n=1 Tax=Zonotrichia albicollis RepID=UPI000393CC54
Uncharacterized protein {ECO:0000313|EMBL:EKC23597.1}; Flags: Fragment;; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
BBS7; Bardet-Biedl syndrome 7
SCNpilot_expt_500_bf_scaffold_2626_25
unknown

Not on your lists

comp(16821..16913)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 25 items

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