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SCNpilot_expt_500_bf_scaffold_2797

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2797_1
unknown

Not on your lists

3..383
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2797_2
unknown

Not on your lists

380..547
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2797_3
unknown

Not on your lists

1043..1747
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2797_4
unknown

Not on your lists

comp(2900..3448)
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2797_5
Heterocephalus glaber, Heterocephalus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

comp(3799..4245)
DNA (447bp) protein (149aa)
PREDICTED: pseudouridine-5''''-monophosphatase isoform X1 n=1 Tax=Heterocephalus glaber RepID=UPI00034FCAFB
Hdhd1; haloacid dehalogenase-like hydrolase domain containing 1
Haloacid dehalogenase-like hydrolase domain-containing protein 1A {ECO:0000313|EMBL:EHB03944.1}; Flags: Fragment;; TaxID=10181 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricognathi; Bathyergidae; Heterocephalus.;" source="Heterocephalus glaber (Naked mole rat).;"
SCNpilot_expt_500_bf_scaffold_2797_6
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

Not on your lists

comp(4378..4587)
DNA (210bp) protein (70aa)
PREDICTED: pseudouridine-5''''-monophosphatase-like n=1 Tax=Aplysia californica RepID=UPI0003599D76
Uncharacterized protein {ECO:0000313|EMBL:CEK59009.1}; Flags: Fragment;; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupulmonata; Stylommatophora; Sigmurethra; Arionoidea; Arionidae; Arion.;" source="Arion vulgaris.;"
GA13732 gene product from transcript GA13732-RA
SCNpilot_expt_500_bf_scaffold_2797_7
unknown

Not on your lists

4643..4792
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2797_8
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

Not on your lists

comp(4758..5402)
DNA (645bp) protein (215aa)
Serine hydroxymethyltransferase {ECO:0000256|RuleBase:RU000585}; EC=2.1.2.1 {ECO:0000256|RuleBase:RU000585};; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella.;" source="Helobdella robusta (Californian leech).;"
Serine hydroxymethyltransferase n=1 Tax=Helobdella robusta RepID=T1G995_HELRO
serine hydroxymethyltransferase, mitochondrial-like
SCNpilot_expt_500_bf_scaffold_2797_9
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(5344..5853)
DNA (510bp) protein (170aa)
serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase {ECO:0000256|RuleBase:RU000585}; EC=2.1.2.1 {ECO:0000256|RuleBase:RU000585};; TaxID=4577 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogoneae; Zea.;" source="Zea mays (Maize).;"
Serine hydroxymethyltransferase n=1 Tax=Zea mays RepID=B6U5N6_MAIZE
SCNpilot_expt_500_bf_scaffold_2797_10
Helicosporidium sp. ATCC 50920, Helicosporidium, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(6095..6301)
DNA (207bp) protein (69aa)
Serine hydroxymethyltransferase {ECO:0000256|RuleBase:RU000585}; EC=2.1.2.1 {ECO:0000256|RuleBase:RU000585};; TaxID=1291522 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Helicosporidium.;" source="Helicosporidium sp. ATCC 50920.;"
Serine hydroxymethyltransferase n=1 Tax=Amphimedon queenslandica RepID=I1FJH7_AMPQE
serine hydroxymethyltransferase, mitochondrial-like
SCNpilot_expt_500_bf_scaffold_2797_11
unknown

Not on your lists

comp(7221..7355)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2797_12
unknown

Not on your lists

8317..9375
DNA (1059bp) protein (353aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2797_13
unknown

Not on your lists

9969..12071
DNA (2103bp) protein (701aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2797_14
unknown

Not on your lists

12102..12302
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2797_15
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

comp(12862..13035)
DNA (174bp) protein (58aa)
ATP-dependent RNA helicase Ddx1; K13177 ATP-dependent RNA helicase DDX1 [EC:3.6.4.13]
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3JEL5_STRPU
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_025005-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
SCNpilot_expt_500_bf_scaffold_2797_16
Schistosoma haematobium, Schistosoma, Strigeidida, Digenea, Platyhelminthes, Metazoa

Not on your lists

comp(13381..13650)
DNA (270bp) protein (90aa)
DEAD box ATP-dependent RNA helicase ; K13177 ATP-dependent RNA helicase DDX1 [EC:3.6.4.13]
Putative dead box ATP-dependent RNA helicase n=1 Tax=Schistosoma mansoni RepID=G4VST9_SCHMA
ATP-dependent RNA helicase DDX1 {ECO:0000313|EMBL:KGB39151.1}; TaxID=6185 species="Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma.;" source="Schistosoma haematobium (Blood fluke).;"
SCNpilot_expt_500_bf_scaffold_2797_17
Trichuris suis, Trichuris, Trichocephalida, Dorylaimia, Nematoda, Metazoa

Not on your lists

comp(13789..13977)
DNA (189bp) protein (63aa)
NV14971; ATP-dependent RNA helicase Ddx1-like; K13177 ATP-dependent RNA helicase DDX1 [EC:3.6.4.13]
PREDICTED: ATP-dependent RNA helicase Ddx1-like n=1 Tax=Megachile rotundata RepID=UPI000258F4B8
Uncharacterized protein {ECO:0000313|EMBL:KFD66511.1}; TaxID=68888 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichuridae; Trichuris.;" source="Trichuris suis (pig whipworm).;"
SCNpilot_expt_500_bf_scaffold_2797_18
Amblyomma maculatum, Amblyomma, Ixodida, Acari, Arthropoda, Metazoa

Not on your lists

comp(13988..14227)
DNA (240bp) protein (80aa)
Ddx1; ATP-dependent RNA helicase DEAD-box-1; K13177 ATP-dependent RNA helicase DDX1 [EC:3.6.4.13]
Putative uncharacterized protein (Fragment) n=1 Tax=Amblyomma maculatum RepID=G3MIJ1_9ACAR
Putative uncharacterized protein {ECO:0000313|EMBL:AEO33309.1}; Flags: Fragment;; TaxID=34609 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Amblyomminae; Amblyomma.;" source="Amblyomma maculatum (Gulf Coast tick).;"
SCNpilot_expt_500_bf_scaffold_2797_19
Trichoplax adhaerens, Trichoplax, Placozoa, Metazoa

Not on your lists

comp(14755..15108)
DNA (354bp) protein (118aa)
hypothetical protein ; K13177 ATP-dependent RNA helicase DDX1 [EC:3.6.4.13]
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RV64_TRIAD
Putative uncharacterized protein {ECO:0000313|EMBL:EDV25940.1}; TaxID=10228 species="Eukaryota; Metazoa; Placozoa; Trichoplax.;" source="Trichoplax adhaerens (Trichoplax reptans).;"
SCNpilot_expt_500_bf_scaffold_2797_20
Branchiostoma floridae, Branchiostoma, Chordata, Metazoa

Not on your lists

comp(15545..16033)
DNA (489bp) protein (163aa)
hypothetical protein; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3YIC1_BRAFL
Putative uncharacterized protein {ECO:0000313|EMBL:EEN60258.1}; Flags: Fragment;; TaxID=7739 species="Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma.;" source="Branchiostoma floridae (Florida lancelet) (Amphioxus).;"
SCNpilot_expt_500_bf_scaffold_2797_21
Aedes aegypti, Aedes, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(16567..16743)
DNA (177bp) protein (59aa)
tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
AAEL006769-PA n=1 Tax=Aedes aegypti RepID=Q174W2_AEDAE
AAEL006769-PA {ECO:0000313|EMBL:EAT41602.1}; TaxID=7159 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia.;" source="Aedes aegypti (Yellowfever mosquito) (Culex aegypti).;"
SCNpilot_expt_500_bf_scaffold_2797_22
unknown

Not on your lists

comp(17002..17226)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2797_23
Monosiga brevicollis, Monosiga, Choanoflagellida, Eukaryota

Not on your lists

comp(17549..17833)
DNA (285bp) protein (95aa)
hypothetical protein ; K00868 pyridoxine kinase [EC:2.7.1.35]
PREDICTED: pyridoxal kinase-like n=1 Tax=Apis florea RepID=UPI000252B4A5
Predicted protein {ECO:0000313|EMBL:EDQ91718.1}; TaxID=81824 species="Eukaryota; Choanoflagellida; Codonosigidae; Monosiga.;" source="Monosiga brevicollis (Choanoflagellate).;"
SCNpilot_expt_500_bf_scaffold_2797_24
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

Not on your lists

comp(19062..19919)
DNA (858bp) protein (286aa)
Beta-glucosidase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UIW6_SALR5
Beta-glucosidase {ECO:0000313|EMBL:EGD77165.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
betaxylosidase
SCNpilot_expt_500_bf_scaffold_2797_25
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

Not on your lists

comp(20034..20519)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1GCY0_AMPQE
probable beta-D-xylosidase 2-like
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15726268}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
SCNpilot_expt_500_bf_scaffold_2797_26
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

Not on your lists

comp(20632..21435)
DNA (804bp) protein (268aa)
Beta-xylosidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9CB96_CAPO3
Beta-xylosidase {ECO:0000313|EMBL:KJE94694.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
probable beta-D-xylosidase 5-like
Displaying 26 items

View Taxonomy