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SCNpilot_expt_500_bf_scaffold_8038

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8038_1
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..402
DNA (402bp) protein (134aa)
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KDA06859.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KDA06859.1};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
acyl-CoA synthatase (EC:6.2.1.-)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI0003645968
SCNpilot_expt_500_bf_scaffold_8038_2
unknown

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comp(626..748)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8038_3
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(846..1331)
DNA (486bp) protein (162aa)
DNA-binding protein n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7NJ88_9MICC
DNA-binding protein {ECO:0000313|EMBL:EMQ98623.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
helix-turn-helix domain-containing protein
SCNpilot_expt_500_bf_scaffold_8038_4
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1732..2709
DNA (978bp) protein (326aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
dihydroxy-acid dehydratase n=1 Tax=Humibacter albus RepID=UPI0003B36580
SCNpilot_expt_500_bf_scaffold_8038_5
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2706..3524
DNA (819bp) protein (273aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VV92_ARTAR
SCNpilot_expt_500_bf_scaffold_8038_6
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3928..4356
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAN5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ14976.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8038_7
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4479..5414)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000374B1BF
Transcriptional regulator {ECO:0000313|EMBL:CCH74943.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
LysR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_8038_8
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5424..6440)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000372E16F rbh
Ribose ABC transporter permease {ECO:0000313|EMBL:EMQ97433.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
ribose ABC transporter permease
SCNpilot_expt_500_bf_scaffold_8038_9
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6437..7969)
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00035DE731 rbh
ABC transporter {ECO:0000313|EMBL:EMQ97432.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
ABC transporter related
SCNpilot_expt_500_bf_scaffold_8038_10
actinobacterium acMicro-1, Actinobacteria, Actinobacteria, Bacteria

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comp(7966..9111)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003715CCB rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA07689.1}; TaxID=1504316 species="Bacteria; Actinobacteria.;" source="actinobacterium acMicro-1.;"
sugar ABC transporter periplasmic protein; K10439 ribose transport system substrate-binding protein
Displaying 10 items

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