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SCNpilot_expt_500_bf_scaffold_3388

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3388_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..708
DNA (708bp) protein (236aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ATPase PP-loop; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
tRNA(Ile)-lysidine synthase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BBR2_9MICO
SCNpilot_expt_500_bf_scaffold_3388_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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759..1310
DNA (552bp) protein (184aa)
hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
Hypoxanthine phosphoribosyltransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AH51_9MICO
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EPD86075.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
SCNpilot_expt_500_bf_scaffold_3388_3
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1421..3430
DNA (2010bp) protein (670aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ftsH; ATP-dependent Zn protease; K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Microbacterium RepID=H8E5E2_9MICO rbh
SCNpilot_expt_500_bf_scaffold_3388_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3473..4027
DNA (555bp) protein (185aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
folE; GTP cyclohydrolase I; K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5E1_9MICO
SCNpilot_expt_500_bf_scaffold_3388_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4029..4868
DNA (840bp) protein (280aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15]
Dihydropteroate synthase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AVF0_9MICO
SCNpilot_expt_500_bf_scaffold_3388_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4865..5233
DNA (369bp) protein (123aa)
folB; dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25]
Dihydroneopterin aldolase n=2 Tax=Microbacterium RepID=H8E5D9_9MICO
Diguanylate cyclase {ECO:0000313|EMBL:EXJ52444.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_3388_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5230..5823
DNA (594bp) protein (198aa)
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003798052
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EIC08077.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_3388_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5820..6311
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E5D7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52446.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3388_9
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6256..6843
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AAA0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86068.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein; K09167 hypothetical protein
SCNpilot_expt_500_bf_scaffold_3388_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6840..7454
DNA (615bp) protein (205aa)
Membrane-flanked domain DUF304 n=2 Tax=Microbacterium RepID=H8E5D5_9MICO
Membrane protein {ECO:0000313|EMBL:EXJ52448.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein; K08981 putative membrane protein
SCNpilot_expt_500_bf_scaffold_3388_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7439..8377
DNA (939bp) protein (313aa)
Membrane-flanked domain DUF304 n=2 Tax=Microbacterium RepID=H8E5D5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86067.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein; K08981 putative membrane protein
SCNpilot_expt_500_bf_scaffold_3388_12
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8374..8496
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CP91_CLAM3
Rossmann-like domain protein {ECO:0000313|EMBL:KJL19239.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
Displaying 12 items

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