ggKbase home page

SCNpilot_expt_500_bf_scaffold_12654

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12654_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..242)
DNA (240bp) protein (80aa)
oxidoreductase n=1 Tax=Nocardiopsis synnemataformans RepID=UPI00034B4E69
Oxidoreductase {ECO:0000313|EMBL:KHK97572.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
oxidoreductase
SCNpilot_expt_500_bf_scaffold_12654_2
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

772..1206
DNA (435bp) protein (145aa)
Transcriptional regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HRF1_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:EDY55406.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
LysR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_12654_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1305..1811
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000380A856
Uncharacterized protein {ECO:0000313|EMBL:KHK97456.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase
SCNpilot_expt_500_bf_scaffold_12654_4
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1808..2428
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HRF6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KHK97456.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
FAD-dependent oxidoreductase
SCNpilot_expt_500_bf_scaffold_12654_5
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2409..2924
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037B7A78
Uncharacterized protein {ECO:0000313|EMBL:KHK97457.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_12654_6
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2961..3299
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00035EE652
Putative uncharacterized protein {ECO:0000313|EMBL:EDY55403.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
SCNpilot_expt_500_bf_scaffold_12654_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3296..4090
DNA (795bp) protein (265aa)
dehydrogenase with different specificities; K00038 3alpha(or 20beta)-hydroxysteroid dehydrogenase [EC:1.1.1.53] rbh
Dehydrogenase with different specificities n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NB66_MICTS rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KHK97573.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_expt_500_bf_scaffold_12654_8
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4141..5319
DNA (1179bp) protein (393aa)
Hydrolase {ECO:0000313|EMBL:KHK97458.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein id=7719741 bin=CNBR_ACT species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12654_9
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5359..5586
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Gordonia araii NBRC 100433 RepID=G7GZW6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KHK97172.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12654_10
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5671..5913
DNA (243bp) protein (81aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
Ribonuclease VapC n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C0G1_XYLCX
PilT protein domain-containing protein
SCNpilot_expt_500_bf_scaffold_12654_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6050..7249
DNA (1200bp) protein (400aa)
histidine kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B05DC
Signal transduction histidine kinase {ECO:0000313|EMBL:CDK00296.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
signal transduction histidine kinase
SCNpilot_expt_500_bf_scaffold_12654_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7246..7563
DNA (318bp) protein (106aa)
LuxR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B69629
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CDK00295.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Displaying 12 items

View Taxonomy