ggKbase home page

SCNpilot_expt_500_bf_scaffold_7488

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7488_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..367
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5W3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60075.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7488_2
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

929..2011
DNA (1083bp) protein (361aa)
xpbC; DNA or RNA helicase of superfamily II; K10843 DNA excision repair protein ERCC-3 [EC:3.6.4.12]
ATP-dependent DNA helicase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQI9_9MICO
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:KJL31337.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCNpilot_expt_500_bf_scaffold_7488_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2349..3356)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9G5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ52367.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7488_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3434..4126
DNA (693bp) protein (231aa)
Response regulator receiver n=2 Tax=Microbacterium RepID=H8E5W6_9MICO rbh
Response regulator receiver {ECO:0000313|EMBL:EIC07563.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
phoP; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K02483 two-component system, OmpR family, response regulator
SCNpilot_expt_500_bf_scaffold_7488_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4135..5898
DNA (1764bp) protein (588aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
signal transduction histidine kinase; K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
ATP-binding region ATPase domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5W7_9MICO rbh
SCNpilot_expt_500_bf_scaffold_7488_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6068..6262
DNA (195bp) protein (65aa)
WXG100 family type VII secretion target n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7J2_9MICO
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7488_7
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6324..6914)
DNA (591bp) protein (197aa)
60 kDa chaperonin n=2 Tax=Microbacterium RepID=H8E5W9_9MICO
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
groEL; chaperonin GroEL; K04077 chaperonin GroEL
SCNpilot_expt_500_bf_scaffold_7488_8
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7350..7937
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium tuberculosis RepID=Q50811_MYCTU
Putative uncharacterized protein {ECO:0000313|EMBL:AAA88231.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7488_9
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8033..8236)
DNA (204bp) protein (68aa)
cold-shock protein n=1 Tax=Microbacterium RepID=UPI0003753004
Cold-shock protein, DNA-binding {ECO:0000313|EMBL:GAD35281.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
scoF4; cold shock proteins; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_expt_500_bf_scaffold_7488_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8384..8854)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEK2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60068.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7488_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8864..9121)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5X2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60067.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7488_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9168..9977)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7I5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60066.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7488_13
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10133..10534
DNA (402bp) protein (134aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
peptide methionine sulfoxide reductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQK1_9MICO
SCNpilot_expt_500_bf_scaffold_7488_14
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10531..10650
DNA (120bp) protein (40aa)
Nitroreductase {ECO:0000313|EMBL:EIC07572.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Displaying 14 items

View Taxonomy