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SCNpilot_expt_500_bf_scaffold_5303_2

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 882..1796

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E751_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 300.0
  • Bit_score: 474
  • Evalue 7.00e-131
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KDA05051.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 303.0
  • Bit_score: 493
  • Evalue 1.60e-136
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 300.0
  • Bit_score: 460
  • Evalue 4.30e-127
  • rbh

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGCCGATCAGCGATCTGAATCAGTTGCGCACGTTCGTCGTGCTCTACGAGCTGCGCAGCGTGACCGCCGCGGCGGAGTCTCTGCACGTGACGCAGCCGACCGTCAGCTACACGCTGCGGCGCCTGCGCGAGCGGTTCGGCGACGACCTGTTCCGGCGCGAGGGTCACGAGATGGTGCCGACGGGCAAGGCGACGCAGCTGTTCGGCCCGATCCACGACGCGCTGGCTCAGATCGACCAGACGGTCGACGAATCGGATGCCTTCGAGCCGGCATCCTTCACCGGCGCCGTCGCGATGGGGCTCACCTCGATCGGCGAGCAGACGTTCCTGCCGCCGATCATGGCGGCGCTCGAGAACGAGGCGCCGCGGCTGCACCTGCAGGTCGAGCGCCTCGATTCCGACCAGGTCGAGGACGGACTGATCCGCGGCACAGTCGACCTCGCGATGACGGTGTCGATGATCGACAGCCCGCGGCTGTGGCGCACCCACGTGCGTGCGGTCGAGTACGTCGCACTGTCGGCGGCGGCGCATCCGCTGCCCGAGACCGGGCCGGACATGTTCGAGGGGCGGCGGTTCGTGCGGGTGTCGGCGCGCGGCGGGCACATCTTCCCACTGCAGGCGCTGACCGAGCACGGACTCATGCCGCAAGTGGTGCTGACGGTCGAGGAATACGCGACGGTGCCGGCCGTGCTGCAGTCGACCGACCTCGTCGTGCTCATGCCGCGGCACGTCGCCGAGGTGTTCTGCGGCTGGTTCCCCGGGCTGAAGATCGCCGACCTGCCGTGGCCCGGGCAGAGCACGCCAGTGTCGGTGTACAGCCGCCGCGAGGCGAGCCTGTCACCGGCGCAGCGGTGGATCCGCGCGCTCGTGCTCGACTCGGTATCGGCCGGCGAGTACCGGCGCGGTCAGCGGTAG
PROTEIN sequence
Length: 305
MPISDLNQLRTFVVLYELRSVTAAAESLHVTQPTVSYTLRRLRERFGDDLFRREGHEMVPTGKATQLFGPIHDALAQIDQTVDESDAFEPASFTGAVAMGLTSIGEQTFLPPIMAALENEAPRLHLQVERLDSDQVEDGLIRGTVDLAMTVSMIDSPRLWRTHVRAVEYVALSAAAHPLPETGPDMFEGRRFVRVSARGGHIFPLQALTEHGLMPQVVLTVEEYATVPAVLQSTDLVVLMPRHVAEVFCGWFPGLKIADLPWPGQSTPVSVYSRREASLSPAQRWIRALVLDSVSAGEYRRGQR*