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SCNpilot_expt_500_bf_scaffold_5303

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5303_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..777)
DNA (777bp) protein (259aa)
4-oxalomesaconate hydratase (EC:4.2.1.83); K10220 4-oxalmesaconate hydratase [EC:4.2.1.83]
Amidohydrolase 2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E750_9MICO
Amidohydrolase 2 {ECO:0000313|EMBL:EIC07244.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_5303_2
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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882..1796
DNA (915bp) protein (305aa)
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E751_9MICO rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KDA05051.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_5303_3
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1836..2348)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E752_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA05052.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5303_4
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2896..3351)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037ED50A
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADG73202.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_expt_500_bf_scaffold_5303_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3383..4273)
DNA (891bp) protein (297aa)
monooxygenase FAD-binding protein; K03380 phenol 2-monooxygenase [EC:1.14.13.7]
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000368AFF3
Phenol hydroxylase domain-containing protein {ECO:0000313|EMBL:CDK01162.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_expt_500_bf_scaffold_5303_6
unknown

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4896..5327
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5303_7
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5377..6126
DNA (750bp) protein (250aa)
IclR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F2E81 rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:KDA05054.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_5303_8
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6224..6520
DNA (297bp) protein (99aa)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:KJC65058.1}; EC=1.14.13.2 {ECO:0000313|EMBL:KJC65058.1};; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
2-polyprenyl-6-methoxyphenol hydroxylase; K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380B56E
SCNpilot_expt_500_bf_scaffold_5303_9
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6514..7371
DNA (858bp) protein (286aa)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:KJC65058.1}; EC=1.14.13.2 {ECO:0000313|EMBL:KJC65058.1};; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
2-polyprenyl-6-methoxyphenol hydroxylase; K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Microbacterium yannicii RepID=UPI00030F8B79
SCNpilot_expt_500_bf_scaffold_5303_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7638..8942)
DNA (1305bp) protein (435aa)
xylulokinase; K00854 xylulokinase [EC:2.7.1.17]
xylulokinase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036ED1F9 rbh
Xylulokinase {ECO:0000313|EMBL:EIC08030.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_500_bf_scaffold_5303_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9111..10298)
DNA (1188bp) protein (396aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
xylA; xylose isomerase; K01805 xylose isomerase [EC:5.3.1.5]
Xylose isomerase n=2 Tax=Microbacterium RepID=H8E592_9MICO
SCNpilot_expt_500_bf_scaffold_5303_12
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10455..11459
DNA (1005bp) protein (335aa)
LacI family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B46689 rbh
HTH-type transcriptional repressor CytR {ECO:0000313|EMBL:CEA09592.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_5303_13
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11526..11960)
DNA (435bp) protein (145aa)
glycoside hydrolase family protein; K05349 beta-glucosidase [EC:3.2.1.21]
beta-glucosidase n=1 Tax=Humibacter albus RepID=UPI0003B3C6EF
Beta-glucosidase {ECO:0000313|EMBL:KHL02454.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
Displaying 13 items

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