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SCNpilot_expt_500_bf_scaffold_5303_12

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 10455..11459

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B46689 similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 348.0
  • Bit_score: 483
  • Evalue 1.30e-133
  • rbh
HTH-type transcriptional repressor CytR {ECO:0000313|EMBL:CEA09592.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 334.0
  • Bit_score: 468
  • Evalue 7.70e-129
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 333.0
  • Bit_score: 445
  • Evalue 2.10e-122

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Taxonomy

Arthrobacter sp. 11W110_air → Arthrobacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGACCGAGCCCCGCGTCACCCTGGCCGAGATCGCCGCCGAGGCGGGCGTCTCGCTCGCGACGATGTCGAAGGTGCTCAACGGTCGCACCGACGTCTCACCCGCGACCCGCACGCGACTCGAGGCCGAGCTCAAGCGCCACGGCTACACCAAGCGCAGCGCCGGCCGGCGCAGTGAGACCATCGAGCTGGTCTTCCACGAGCTCGAGTCGAGCTGGTCGATGGAGGTCATCGCGGGGGTCGAAGAGGTCGCGCACGCGGCAGGGCTGTCGGTACTGCTGACGGTCAGCGGCGACCGCCACGCCCCGGCGGACGACTGGATCGACGGCGTGCTGCGCCGTCGCCCGCTGGGCGTCGTGCTCGTCTTCTCGGATCTCGCGTCCCCGCATCGCGACAAGCTCCGCTCGCGCGGGGTGCCGTTCGCGATCGTCGATCCCGCCGGTGACCCGGCCCCCGACGTGCCCTCGGTGGGTTCGGCGAACTGGTCGGGTGGGCTGCTGGCCACCCGCCACCTCATCGAGCTCGGACACACCCGCATCGCCGCGATCACGGGCCCCGAAGACATGATGTGCTCCCTCGCCCGCGTCGACGGCTACAGGTCGGCGATGAATGCCGCCGCACTGCCCGTCGACCCGGACTGGGTGCGCTTCGGCGACTTCCACCCGGCCGGTGGTCAGAACCACGCGCGCGAGCTGCTGTCTCGGCCCGACCGGCCGACCGCCGTCTTCGCCGGCAGCGACCTGCAGGCGCTCGGGGTCATCGCCGCCGCCACCGAGGCGGGGCTCAGCGTTCCGCGCGATCTGTCGGTCGTCGGCTACGACGACATCGCGCTCGCCCGGTGGCTGAGCCCGCAGTTGACGACCGTGCATCAGCCGCTGCGGCGGATGGGTGAGGAGGCCACCCGCATCGTGTTGCGCCTCGCCGAAGGCGAGTCGGTCGACACGCTGCGCATGGACCTGGCCACCCACCTCGTCGTCCGTGGCAGCACGGCGCCGCCGGCCGCCTGA
PROTEIN sequence
Length: 335
MTEPRVTLAEIAAEAGVSLATMSKVLNGRTDVSPATRTRLEAELKRHGYTKRSAGRRSETIELVFHELESSWSMEVIAGVEEVAHAAGLSVLLTVSGDRHAPADDWIDGVLRRRPLGVVLVFSDLASPHRDKLRSRGVPFAIVDPAGDPAPDVPSVGSANWSGGLLATRHLIELGHTRIAAITGPEDMMCSLARVDGYRSAMNAAALPVDPDWVRFGDFHPAGGQNHARELLSRPDRPTAVFAGSDLQALGVIAAATEAGLSVPRDLSVVGYDDIALARWLSPQLTTVHQPLRRMGEEATRIVLRLAEGESVDTLRMDLATHLVVRGSTAPPAA*