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SCNpilot_expt_500_bf_scaffold_695

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_695_1
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1503
DNA (1503bp) protein (501aa)
Zinc protease protein-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYU7_RAMTT rbh
zinc protease protein rbh
Zinc protease protein-like protein {ECO:0000313|EMBL:AEG94464.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_expt_500_bf_scaffold_695_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1544..2905
DNA (1362bp) protein (454aa)
peptidase m16 domain-containing protein; K01422 [EC:3.4.99.-]
Peptidase M16 domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF05_ACIET
Peptidase M16 domain protein {ECO:0000313|EMBL:ACM34275.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_expt_500_bf_scaffold_695_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3043..3867
DNA (825bp) protein (275aa)
enoyl-CoA hydratase n=1 Tax=Acidovorax radicis RepID=UPI0002376D85
enoyl-CoA hydratase/isomerase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_500_bf_scaffold_695_4
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3936..4481)
DNA (546bp) protein (182aa)
Hemerythrin HHE cation-binding domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTG7_9BURK
hemerythrin HHE cation-binding domain-containing protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_expt_500_bf_scaffold_695_5
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4616..5227
DNA (612bp) protein (204aa)
putative methyltransferase; K00599 [EC:2.1.1.-]
Putative methyltransferase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TTX7_ACIAC
Putative methyltransferase {ECO:0000313|EMBL:ABM34415.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_expt_500_bf_scaffold_695_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5274..5780
DNA (507bp) protein (169aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 10749
Phosphopantetheine adenylyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1B3_ALIDB
SCNpilot_expt_500_bf_scaffold_695_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5867..6640)
DNA (774bp) protein (258aa)
oxidoreductase fad/NAD(P)-binding domain-containing protein; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] rbh
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAK9_ACIET rbh
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACM31656.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_expt_500_bf_scaffold_695_8
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6761..8470)
DNA (1710bp) protein (570aa)
recJ; single-stranded DNA-specific exonuclease; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] rbh
Candidate single-stranded DNA-specific exonuclease n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXZ3_RAMTT rbh
Candidate single-stranded DNA-specific exonuclease {ECO:0000313|EMBL:AEG94318.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_expt_500_bf_scaffold_695_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8467..9417)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MEF2_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34191.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_expt_500_bf_scaffold_695_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9530..10081)
DNA (552bp) protein (184aa)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_expt_500_bf_scaffold_695_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10276..10710
DNA (435bp) protein (145aa)
LolC/E family lipoprotein releasing system, transmembrane protein id=12553094 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Lipoprotein-releasing systemtransmembrane protein lolC; K09808 lipoprotein-releasing system permease protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_500_bf_scaffold_695_12
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10766..11434
DNA (669bp) protein (223aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
lipoprotein releasing system ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
Lipoprotein releasing system, ATP-binding protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VSC5_POLNA
SCNpilot_expt_500_bf_scaffold_695_13
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11539..12279
DNA (741bp) protein (247aa)
GntR family transcriptional regulator n=1 Tax=Advenella kashmirensis W13003 RepID=V8QUX4_9BURK
GntR family transcriptional regulator {ECO:0000313|EMBL:ETF03148.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
GntR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_695_14
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12283..13839)
DNA (1557bp) protein (519aa)
Fatty-acid--CoA ligase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QID6_RALPI rbh
Fatty-acid--CoA ligase {ECO:0000313|EMBL:AGW89031.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
AMP-dependent synthetase and ligase
SCNpilot_expt_500_bf_scaffold_695_15
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13836..14054)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QDH2_RALPI
Uncharacterized protein {ECO:0000313|EMBL:AGW89029.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
biotin/lipoyl attachment domain-containing protein
SCNpilot_expt_500_bf_scaffold_695_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14208..15197
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Comamonas testosteroni RepID=B7X491_COMTE
TctC; K07795 putative tricarboxylic transport membrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_expt_500_bf_scaffold_695_17
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15194..16777
DNA (1584bp) protein (528aa)
Carboxyl transferase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QU46_9BURK rbh
Carboxyl transferase {ECO:0000313|EMBL:ETF03152.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
propionyl-CoA carboxylase rbh
SCNpilot_expt_500_bf_scaffold_695_18
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16955..19435)
DNA (2481bp) protein (827aa)
mgtA; Magnesium-transporting ATPase, P-type 1 (Mg(2+) transport ATPase, P-type 1) (EC:3.6.3.2)
Magnesium-transporting ATPase, P-type 1 (Mg(2+) transport ATPase, P-type 1) {ECO:0000313|EMBL:CAZ87271.1}; EC=3.6.3.2 {ECO:0000313|EMBL:CAZ87271.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Magnesium-transporting ATPase, P-type 1 (Mg(2+) transport ATPase, P-type 1) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRN0_THIA3
SCNpilot_expt_500_bf_scaffold_695_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19855..20949)
DNA (1095bp) protein (365aa)
Mg-chelatase subunit ChlD n=1 Tax=Variovorax sp. CF313 RepID=J3CF67_9BURK
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:EJL70191.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
von willebrand factor type a; K07114 uncharacterized protein
SCNpilot_expt_500_bf_scaffold_695_20
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20983..21999)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2UEE4_9BURK
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_expt_500_bf_scaffold_695_21
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22030..22164)
DNA (135bp) protein (45aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase associated with various cellular activities, AAA_3 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VSB5_POLNA
ATPase associated with various cellular activities, AAA_3 {ECO:0000313|EMBL:ABM38543.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_expt_500_bf_scaffold_695_22
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22182..23048)
DNA (867bp) protein (289aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase associated with various cellular activities, AAA_3 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VSB5_POLNA
ATPase associated with various cellular activities, AAA_3 {ECO:0000313|EMBL:ABM38543.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_expt_500_bf_scaffold_695_23
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23074..23985)
DNA (912bp) protein (304aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBA1_ACIAP
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ADX44963.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_expt_500_bf_scaffold_695_24
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24066..24464
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Rheinheimera perlucida RepID=UPI000377597D
Uncharacterized protein {ECO:0000313|EMBL:EON90847.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lipolyticus SM19.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_695_25
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24498..25370
DNA (873bp) protein (291aa)
TatD-like protein deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-]
TatD-like protein deoxyribonuclease n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KXH3_9BURK rbh
DNAase {ECO:0000313|EMBL:EYC52213.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
SCNpilot_expt_500_bf_scaffold_695_26
unknown

Not on your lists

comp(25403..25561)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_695_27
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25762..27243
DNA (1482bp) protein (494aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TNT3_ACIAC
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABM32621.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_expt_500_bf_scaffold_695_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27265..30459
DNA (3195bp) protein (1065aa)
acriflavin resistance protein n=1 Tax=Variovorax paradoxus RepID=UPI0003694BA5
mdtB; multidrug resistance protein MdtB
Multidrug resistance protein MdtB {ECO:0000313|EMBL:AGU50812.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_expt_500_bf_scaffold_695_29
unknown

Not on your lists

30456..31163
DNA (708bp) protein (236aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_695_30
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31160..34432
DNA (3273bp) protein (1091aa)
Acriflavin resistance protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TNT5_ACIAC
acriflavin resistance protein; K07789 RND superfamily, multidrug transport protein MdtC
Acriflavin resistance protein {ECO:0000313|EMBL:ABM32623.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Displaying items 1-30 of 44 in total

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