ggKbase home page

SCNpilot_expt_500_bf_scaffold_4716

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4716_1
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150..812)
DNA (663bp) protein (221aa)
Putative acetyl transferase protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZJF3_THASP rbh
acetyl transferase protein rbh
Putative acetyl transferase protein {ECO:0000313|EMBL:ACK53886.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
SCNpilot_expt_500_bf_scaffold_4716_2
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1247..1510)
DNA (264bp) protein (88aa)
plasmid stabilization protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375E75
Uncharacterized protein {ECO:0000313|EMBL:CEJ66599.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
COG0238: Ribosomal protein S18
SCNpilot_expt_500_bf_scaffold_4716_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1535..2125)
DNA (591bp) protein (197aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) rbh
Undecaprenyl-phosphate galactose phosphotransferase {ECO:0000313|EMBL:ABM43168.1}; EC=2.7.8.6 {ECO:0000313|EMBL:ABM43168.1};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Undecaprenyl-phosphate galactose phosphotransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA93_ACISJ rbh
SCNpilot_expt_500_bf_scaffold_4716_4
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2737..3990)
DNA (1254bp) protein (418aa)
Glycosyl transferase, group 1 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA92_ACISJ rbh
group 1 glycosyl transferase rbh
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABM43167.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_500_bf_scaffold_4716_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3994..5136)
DNA (1143bp) protein (381aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14) rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ABM43166.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ABM43166.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA91_ACISJ rbh
SCNpilot_expt_500_bf_scaffold_4716_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5220..5621)
DNA (402bp) protein (134aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=32042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri ATCC 14405 = CCUG 16156.;"
Ribonuclease VapC n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7F0V0_PSEST
mvpA; hypothetical protein; K07062
SCNpilot_expt_500_bf_scaffold_4716_7
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5624..5854)
DNA (231bp) protein (77aa)
SpoVT/AbrB-like protein n=1 Tax=Pseudomonas sp. M47T1 RepID=I4MYF5_9PSED
SpoVT/AbrB-like protein {ECO:0000313|EMBL:EIK94245.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
virulence-assiciated protein MvpT
SCNpilot_expt_500_bf_scaffold_4716_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5927..7063)
DNA (1137bp) protein (379aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA88_ACISJ rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABM43163.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_500_bf_scaffold_4716_9
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7084..8169)
DNA (1086bp) protein (362aa)
UDP-galactose-4-epimerase {ECO:0000313|EMBL:KHL70807.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KHL70807.1};; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
UDP-glucose 4-epimerase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTT9_9DELT rbh
galE; UDP-glucose 4-epimerase rbh
SCNpilot_expt_500_bf_scaffold_4716_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8335..9573)
DNA (1239bp) protein (413aa)
Predicted glycosyl transferase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K593_CUPNH rbh
Glycosyl transferase {ECO:0000313|EMBL:KGH06018.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
rfaG2; glycosyl transferase rbh
SCNpilot_expt_500_bf_scaffold_4716_11
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9570..11069)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030B54D3 rbh
Uncharacterized protein {ECO:0000313|EMBL:EON19592.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_4716_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11263..11877)
DNA (615bp) protein (205aa)
Group 1 glycosyl transferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1V9_9BURK
group 1 glycosyl transferase
Group 1 glycosyl transferase {ECO:0000313|EMBL:AFU45174.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 12 items

View Taxonomy