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SCNpilot_expt_500_bf_scaffold_2104

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2104_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1839
DNA (1839bp) protein (613aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] rbh
Dihydroxy-acid dehydratase n=2 Tax=Alicycliphilus denitrificans RepID=E8U061_ALIDB rbh
SCNpilot_expt_500_bf_scaffold_2104_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1851..2576
DNA (726bp) protein (242aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100) rbh
oxidoreductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363BACF rbh
Dehydrogenase {ECO:0000313|EMBL:GAD21112.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_expt_500_bf_scaffold_2104_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2752..2967)
DNA (216bp) protein (72aa)
bacterioferritin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003675963
Bacterioferritin {ECO:0000256|RuleBase:RU000623}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
bacterioferritin; K03594 bacterioferritin
SCNpilot_expt_500_bf_scaffold_2104_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3379..4218
DNA (840bp) protein (280aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
lgt; prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
Prolipoprotein diacylglyceryl transferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1J6_9BURK
SCNpilot_expt_500_bf_scaffold_2104_5
unknown

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4280..4486
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2104_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4572..5558
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKK9_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS19163.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_expt_500_bf_scaffold_2104_7
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5539..6333
DNA (795bp) protein (265aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KWF4_9BURK rbh
enoyl-CoA hydratase/isomerase rbh
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_expt_500_bf_scaffold_2104_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6357..7931
DNA (1575bp) protein (525aa)
Malonyl-CoA synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HV32_9BURK
malonyl-CoA synthase
Malonyl-CoA synthase {ECO:0000313|EMBL:AFU46813.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_500_bf_scaffold_2104_9
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8036..8644
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI00036EFA50
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
SCNpilot_expt_500_bf_scaffold_2104_10
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8746..9189)
DNA (444bp) protein (148aa)
UspA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X51_RHOFD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_expt_500_bf_scaffold_2104_11
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9341..9877
DNA (537bp) protein (179aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal translocating P-type ATPase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTV2_POLNA
FUPA27 P-type ATPase {ECO:0000313|EMBL:CDS53245.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
SCNpilot_expt_500_bf_scaffold_2104_12
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9829..11604
DNA (1776bp) protein (592aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal translocating P-type ATPase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTV2_POLNA
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCNpilot_expt_500_bf_scaffold_2104_13
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11604..11741
DNA (138bp) protein (46aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X48_RHOFD
cbb3-type cytochrome oxidase maturation protein
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:ABD69655.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
SCNpilot_expt_500_bf_scaffold_2104_14
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11809..13245
DNA (1437bp) protein (479aa)
cbb3-type cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] rbh
cytochrome oxidase subunit I n=1 Tax=Brachymonas chironomi RepID=UPI000364C1FC rbh
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
SCNpilot_expt_500_bf_scaffold_2104_15
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13263..13880
DNA (618bp) protein (206aa)
peptidase S41 n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002D40FA7 rbh
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCNpilot_expt_500_bf_scaffold_2104_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13901..14041
DNA (141bp) protein (47aa)
Cbb3-type cytochrome oxidase component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNW1_9BURK
Cbb3-type cytochrome oxidase component {ECO:0000313|EMBL:EIK90901.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Cbb3-type cytochrome oxidase component; K00407 cytochrome c oxidase cbb3-type subunit IV
SCNpilot_expt_500_bf_scaffold_2104_17
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14076..14630
DNA (555bp) protein (185aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTU7_POLNA
cbb3-type cytochrome c oxidase subunit III; K00406 cytochrome c oxidase cbb3-type subunit III
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Displaying 17 items

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