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SCNpilot_expt_500_bf_scaffold_3975_21

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 20900..22243

Top 3 Functional Annotations

Value Algorithm Source
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.; similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 448.0
  • Bit_score: 762
  • Evalue 4.50e-217
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Brachymonas chironomi RepID=UPI00036E11E5 similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 442.0
  • Bit_score: 763
  • Evalue 1.40e-217
  • rbh
miaB; tRNA-i(6)A37 modification enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 443.0
  • Bit_score: 734
  • Evalue 1.70e-209
  • rbh

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGTCCCGCAAAGTCTTCATCAAGACCTTCGGCTGCCAGATGAACGAGTACGACTCGGCCAAGATGGCCGACGTGCTGGGCGCCGCCCAGGGCTACGAGCCCACCGACGACCCCGAGGCGGCCGACCTGATCCTGTTCAACACCTGCTCGGTGCGCGAGAAGGCGCAGGAAAAGGTGTTTTCCGACCTCGGCCGCGTCAAGCACCTGAAGGCCAGGGGCACGCTGATCGGCGTCGGCGGCTGCGTGGCCAGCCAGGAGGGCGAGGCCATCATCCGGCGCGCGCCCTACGTGGACGTGGTGTTCGGCCCGCAGACCCTGCACCGCCTGCCCGAGCTGCTGGCCGAGCGCCAGCGCGCCCAGGCGCCGCAGGTGGACATCCGCTTTCCCGAGATCGAGAAGTTCGACCACCTGCCACCGGCGCGCGTCGAGGGCGCCAGCGCCTTTGTCTCGATCATGGAGGGTTGCTCCAAATACTGCAGCTACTGCGTGGTGCCCTACACGCGCGGCGAGGAGTTCAGCCGCCCGTTCGACGACGTGCTGACCGAAGTCGCCGGCCTGGCCGACCAGGGCGTCAAGGAAGTCACCCTGCTGGGCCAGAACGTCAATGCCTACCGCGGGCCGATGGGTGACAGCGGCGAGATCGCCGACTTCGCCCTGCTGATCGAATACGTGGCCGACATCCCCGGCATCGAGCGCATCCGCTACACCACCAGCCACCCCAACGAATTCACCCCGCGCCTGATCGAGGTGTATGGCAAGGTCGACAAGCTGGTCAGCCACCTGCACCTGCCGGTGCAGCACGGCAGCGACCGCATCCTGATGGCCATGAAGCGGGGCTACACCGCCATGGAATACAAGAGCATCATCCGCAAGCTGCGCGCGGTGCGGCCGGGCCTCAGCCTGTCGAGCGACTTCATCGTCGGCTTTCCGGGCGAGACCGCGCAGGACTTCGACAAGCTGATGAAGCTGATCGAGGACGTGGGCTACGACGCCTCCTTCAGCTTCATCTTCAGCCCGCGCCCCGGCACGCCGGCGGCCAACCTGCACGACGACACGCCACACGAGGTCAAGCTCCAGCGGCTGCGGCACCTGCAGGCGGTGGTCGAGCAGCACGTGCGCGCCATCAGTGCCAGCCGCGTGGGCACGCGCCAGCGCATCCTGGTGGAAGGCCCTTCGCGGCGCAACCCGCACGAGCTGATGGGCCGCACCGAGTGCAACCGCATCGTCAACTTCGACGCCGGCCTGCGGGGCGCGCGCCTGGTCGGCCAGATGATCGAGGTCGACATCACCGAGGCGCTGCCGCATTCGCTGCGCGGGCGGGTCGTGCTGGCGGCCGCCGACTGA
PROTEIN sequence
Length: 448
MSRKVFIKTFGCQMNEYDSAKMADVLGAAQGYEPTDDPEAADLILFNTCSVREKAQEKVFSDLGRVKHLKARGTLIGVGGCVASQEGEAIIRRAPYVDVVFGPQTLHRLPELLAERQRAQAPQVDIRFPEIEKFDHLPPARVEGASAFVSIMEGCSKYCSYCVVPYTRGEEFSRPFDDVLTEVAGLADQGVKEVTLLGQNVNAYRGPMGDSGEIADFALLIEYVADIPGIERIRYTTSHPNEFTPRLIEVYGKVDKLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSIIRKLRAVRPGLSLSSDFIVGFPGETAQDFDKLMKLIEDVGYDASFSFIFSPRPGTPAANLHDDTPHEVKLQRLRHLQAVVEQHVRAISASRVGTRQRILVEGPSRRNPHELMGRTECNRIVNFDAGLRGARLVGQMIEVDITEALPHSLRGRVVLAAAD*