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SCNpilot_expt_500_bf_scaffold_4138_14

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 9763..10137

Top 3 Functional Annotations

Value Algorithm Source
TRAP C4-dicarboxylate transport system permease n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HNQ5_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 121.0
  • Bit_score: 192
  • Evalue 2.20e-46
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KES23255.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 121.0
  • Bit_score: 192
  • Evalue 3.10e-46
dctM; putative TRAP dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 122.0
  • Bit_score: 191
  • Evalue 2.00e-46

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Taxonomy

Pseudomonas sp. AAC → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGCGCCGCTCATGGTGCTGGCCGCGATCCTGCTGATCTACATCCTGCTGGGCTGCGTGATGGATTCGCTGGCCATGATCCTGCTGACCATCCCGATCTTCTACCCGGTCATCATGGGCCTGGATTTCTGGGGCCTGAGCCAGGGCGACAAGTCGATCTGGTTCGGCATCCTGGCGCTGATGGTGGTCGAGATCGGCCTGATCACGCCGCCCATGGGCATGAACCTGTTCATCATCCAGAAGATGTCGCGCAACGTGCCACTGATGGAAACGGCGCGCGGGGTGGTGCCCTTCCTGGTGTCCGACCTGCTGCGCATCGTGCTGCTGACGCTGTTCCCGGCGCTGGCCCTGTGGCTGGTGAACGTGGCCGGGTAA
PROTEIN sequence
Length: 125
MAPLMVLAAILLIYILLGCVMDSLAMILLTIPIFYPVIMGLDFWGLSQGDKSIWFGILALMVVEIGLITPPMGMNLFIIQKMSRNVPLMETARGVVPFLVSDLLRIVLLTLFPALALWLVNVAG*