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SCNpilot_expt_500_bf_scaffold_5319_14

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(10858..11583)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein id=5083508 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 241.0
  • Bit_score: 307
  • Evalue 1.20e-80
membrane protein similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 236.0
  • Bit_score: 299
  • Evalue 1.30e-78
Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 241.0
  • Bit_score: 307
  • Evalue 1.60e-80

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
GTGCGCTTCGACGTGCGGCGGCTGGCGGTGACGCCGCGCGCGCTGGCGCTGGGGGTGTACGGGCTGTTCGGCTACCACTTCCTGCTGTTCACGGCGCTGCAGCTGGCGCCGCCGGTGGAGGCCAACCTGGTCAACTACCTGTGGCCGCTGGGCATCGTGGTGCTGGCCCCGCTGCTGCTGCCGGGCGTGCGGCTGGCGCCGGCGCACCTGGGCGCCGCGCTGGCGGGGCTGGCGGGCGCGGCGATCGCCATCCTGGGGCGCGGCGCGGGCGCCGAATCGGGCGGTGCCGGCCACCCGCTGGCGCCGCTGGGCTTTGCCTGCGCGGCGGGGGCGGCGCTGATCTGGTCGAGCTATTCGGTGCTGAGCAAGCGGCTGGCCAGCACGCGCCATGCGTTTCCCACGGCGGCCATCGGCACCTTTGGCTGCGTCTCGGGTCTGCTGTCGCTGCTGTGCCATGTGTGGCTAGAGCCGGCCGTGAGCCTGAGCGCGCGCGACGGGCTGCTGATCGCCGTGCTGGGCCTGGGGCCGCTGGGCGGGGCGTTCTTTTTGTGGGACGCGGCGCTGAAGCTGGGCGACACGCGCCAGATCGGCGTGCTGAGCTACCTGACGCCGCTGCTGTCCACCCTGACCCTGCTGTGGGTGACGGGCCGGCCGCTCAGCGGCAGCATCGCGCTGGCAACGGCGCTGATTCTGGGCGCGGCGGTGGTGGGAACGCGGGCGCGCTGA
PROTEIN sequence
Length: 242
VRFDVRRLAVTPRALALGVYGLFGYHFLLFTALQLAPPVEANLVNYLWPLGIVVLAPLLLPGVRLAPAHLGAALAGLAGAAIAILGRGAGAESGGAGHPLAPLGFACAAGAALIWSSYSVLSKRLASTRHAFPTAAIGTFGCVSGLLSLLCHVWLEPAVSLSARDGLLIAVLGLGPLGGAFFLWDAALKLGDTRQIGVLSYLTPLLSTLTLLWVTGRPLSGSIALATALILGAAVVGTRAR*