name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_841_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..1155
|
deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003112D39
rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative deoxyguanosinetriphosphate triphosphohydrolase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_841_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1205..1480)
|
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCE78
Uncharacterized protein {ECO:0000313|EMBL:AJP72047.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_500_bf_scaffold_841_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1707..3221
|
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630133
rbh
Uncharacterized protein {ECO:0000313|EMBL:AJP72046.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_841_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3227..4384
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FD503B
rbh
Uncharacterized protein {ECO:0000313|EMBL:AJP72045.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_841_5
unknown
|
Not on your lists |
4450..5562
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_841_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5701..6423
|
Lysophospholipase n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GHL3_9SPHN
putative lysophospholipase
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:KEZ19290.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
|
|
SCNpilot_expt_500_bf_scaffold_841_7
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6565..7668
|
mdoC; glucans biosynthesis protein; K11941 glucans biosynthesis protein C [EC:2.1.-.-]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037D5E8C
Glucans biosynthesis protein C {ECO:0000313|EMBL:EKJ95968.1}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;"
|
|
SCNpilot_expt_500_bf_scaffold_841_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8127..8852
|
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8ACL0_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EMS95612.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_841_9
unknown
|
Not on your lists |
9035..9307
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_841_10
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9312..9965)
|
Transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2DDV8_9SPHN
Transcriptional regulator {ECO:0000313|EMBL:EJK80962.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_500_bf_scaffold_841_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria
|
Not on your lists |
comp(10111..11667)
|
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
|
|
SCNpilot_expt_500_bf_scaffold_841_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12081..12557
|
sporulation domain-containing protein n=1 Tax=Sphingomonas elodea RepID=UPI00026301A5
Sporulation protein {ECO:0000313|EMBL:AJP72043.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_841_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12670..13677
|
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
beta-N-acetylhexosaminidase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
beta-hexosaminidase n=1 Tax=Sphingomonas elodea RepID=UPI00026301A6
rbh
|
|
SCNpilot_expt_500_bf_scaffold_841_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13736..14470
|
chromosome segregation and condensation protein ScpA n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031A4909
rbh
Chromosome segregation protein ScpA {ECO:0000313|EMBL:AJP72039.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A
rbh
|
|
SCNpilot_expt_500_bf_scaffold_841_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14467..15072
|
segregation and condensation protein B n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DDE87A
rbh
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B
|
|
SCNpilot_expt_500_bf_scaffold_841_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15145..15378
|
preprotein translocase subunit TatA n=1 Tax=Sphingomonas elodea RepID=UPI0002631728
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
tatA; twin arginine translocase protein A
|
|
SCNpilot_expt_500_bf_scaffold_841_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15435..15989
|
twin-arginine translocation protein subunit TatB n=1 Tax=Sphingomonas elodea RepID=UPI0002631729
Sphingomonas taxi strain 30a NODE_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26950.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
twin-arginine translocation protein TatB subunit; K03117 sec-independent protein translocase protein TatB
|
|
SCNpilot_expt_500_bf_scaffold_841_18
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15986..16774
|
preprotein translocase subunit TatC n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000317E5EE
rbh
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
Sec-independent protein translocase TatC; K03118 sec-independent protein translocase protein TatC
|
|
SCNpilot_expt_500_bf_scaffold_841_19
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16830..16964)
|
Entericidin EcnA/B family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WYM5_9SPHN
Entericidin EcnAB {ECO:0000313|EMBL:AJP72035.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_500_bf_scaffold_841_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17276..18850)
|
histidine kinase n=1 Tax=Sphingomonas elodea RepID=UPI0002631AB8
rbh
Histidine kinase {ECO:0000313|EMBL:AJP72034.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative signal transduction histidine kinase
|
|
SCNpilot_expt_500_bf_scaffold_841_21
unknown
|
Not on your lists |
comp(18861..19028)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_841_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19312..20109
|
chemotaxis protein CheY n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F6FE6C
rbh
Phyllosphere-induced regulator PhyR {ECO:0000313|EMBL:AJP72033.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
CheY-like response regulator
|
|
SCNpilot_expt_500_bf_scaffold_841_23
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20181..20318
|
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VF36_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70902.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_expt_500_bf_scaffold_841_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20414..21073
|
RNA polymerase sigma 70 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036868BF
rbh
RNA polymerase sigma 70 {ECO:0000313|EMBL:AJP72032.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ECF subfamily RNA polymerase sigma-24 factor
rbh
|
|
SCNpilot_expt_500_bf_scaffold_841_25
unknown
|
Not on your lists |
comp(21148..21321)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_841_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21396..24083
|
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160, ECO:0000313|EMBL:AJP72031.1}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
glutamate-ammonia ligase adenylyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D3CAE1
rbh
glutamate-ammonia-ligase adenylyltransferase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_841_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24094..24567
|
alkyl hydroperoxide reductase n=1 Tax=Sphingomonas elodea RepID=UPI0002630DC4
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AJP72030.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
alkyl hydroperoxide reductase
|
|
SCNpilot_expt_500_bf_scaffold_841_28
unknown
|
Not on your lists |
24567..24902
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_841_29
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24904..25704
|
rhamnosyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002630DC5
rbh
Rhamnosyltransferase {ECO:0000313|EMBL:AJP74417.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_841_30
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25828..27018
|
peptidase M23 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030CCFA6
rbh
Peptidase M23 {ECO:0000313|EMBL:AJP72029.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
peptidase M23B
rbh
|