name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_904_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..868)
|
polyhydroxybutyrate depolymerase n=1 Tax=Sphingomonas elodea RepID=UPI00026316CD
rbh
Polyhydroxybutyrate depolymerase {ECO:0000313|EMBL:AJP74684.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_500_bf_scaffold_904_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
947..2551
|
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:AJP74685.1}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:AJP74685.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
L-aspartate oxidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F77198
rbh
|
|
SCNpilot_expt_500_bf_scaffold_904_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2623..3981
|
Alg9-like mannosyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G604_NOVAD
rbh
Alg9 family protein mannosyltransferase {ECO:0000313|EMBL:GAO56558.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Alg9-like mannosyltransferase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_904_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4145..5266
|
Beta-lactamase {ECO:0000256|SAAS:SAAS00063099, ECO:0000313|EMBL:AJP74686.1}; EC=3.5.2.6 {ECO:0000256|SAAS:SAAS00063099};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
beta-lactamase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031F247C
rbh
|
|
SCNpilot_expt_500_bf_scaffold_904_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5450..8206
|
DNA polymerase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003032D50
rbh
DNA polymerase {ECO:0000313|EMBL:AJP73637.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_500_bf_scaffold_904_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8215..9516
|
polysaccharide biosynthesis protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E23F6F
rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AJP73638.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative polysaccharide transporter
|
|
SCNpilot_expt_500_bf_scaffold_904_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9686..11257)
|
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
rbh
IMP cyclohydrolase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F53EFE
rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_500_bf_scaffold_904_8
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11360..11566)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IJY7_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA91805.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
|
|
SCNpilot_expt_500_bf_scaffold_904_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11602..13335)
|
heparinase n=1 Tax=Sphingomonas elodea RepID=UPI0002630757
rbh
Heparinase {ECO:0000313|EMBL:AJP73641.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_904_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13332..13988)
|
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:AJP74687.1}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
rpe; ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
ribulose-phosphate 3-epimerase n=1 Tax=Sphingomonas elodea RepID=UPI0002630756
rbh
|
|
SCNpilot_expt_500_bf_scaffold_904_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14026..14532)
|
Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
SAM-dependent methlyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002630DB7
SAM-dependent methlyltransferase {ECO:0000313|EMBL:AJP73642.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_500_bf_scaffold_904_12
unknown
|
Not on your lists |
14690..15355
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_904_13
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15331..15489
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000382AE0D
Uncharacterized protein {ECO:0000313|EMBL:GAO40281.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
|
|
SCNpilot_expt_500_bf_scaffold_904_14
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15486..16022)
|
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD664
Uncharacterized protein {ECO:0000313|EMBL:GAM99693.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_904_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16019..16999)
|
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
rbh
glycerol-3-phosphate dehydrogenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E21CCE
rbh
|
|
SCNpilot_expt_500_bf_scaffold_904_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16996..18159)
|
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphapr
protein kinase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BBAA
UGMP family protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_904_17
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18226..19140
|
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260, ECO:0000313|EMBL:AJP73645.1}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61)
rbh
porphobilinogen deaminase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00035EDA1B
rbh
|
|
SCNpilot_expt_500_bf_scaffold_904_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19137..19805
|
uroporphyrinogen-III synthase n=1 Tax=Sphingomonas elodea RepID=UPI00026319DB
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:AJP73646.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
uroporphyrinogen III synthase HEM4
|
|
SCNpilot_expt_500_bf_scaffold_904_19
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19837..20670
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003077858
Uncharacterized protein {ECO:0000313|EMBL:AJP73647.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_904_20
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20791..21975
|
acyl-CoA dehydrogenase n=1 Tax=Sphingomonas elodea RepID=UPI00026319DD
rbh
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:BAF89556.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
|
|
SCNpilot_expt_500_bf_scaffold_904_21
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21975..22493
|
acetyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI00026319DE
Acetyltransferase {ECO:0000313|EMBL:AJP73648.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
acetyltransferase
|
|
SCNpilot_expt_500_bf_scaffold_904_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22490..23596
|
L-carnitine dehydratase n=1 Tax=Sphingomonas elodea RepID=UPI00026319DF
rbh
CoA-transferase {ECO:0000313|EMBL:AJP73649.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
L-carnitine dehydratase/bile acid-inducible protein F
|
|
SCNpilot_expt_500_bf_scaffold_904_23
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23672..26584)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003637CE5
rbh
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:EZP56168.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_904_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26868..27665)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003010D0F
rbh
Uncharacterized protein {ECO:0000313|EMBL:AJP74689.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_904_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27726..28151)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00037D447B
Uncharacterized protein {ECO:0000313|EMBL:AJP74690.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_904_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28536..29438
|
thioredoxin n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00037D8F9A
rbh
Thioredoxin {ECO:0000313|EMBL:AJP73650.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
thioredoxin domain-containing protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_904_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29435..30055
|
ATP-dependent protease n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030D2DB9
rbh
ATP-dependent protease {ECO:0000313|EMBL:AJP73651.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
peptidase S16, lon-like; K07157
|
|
SCNpilot_expt_500_bf_scaffold_904_28
Komagataeibacter medellinensis, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30052..30447
|
Putative uncharacterized protein n=1 Tax=Gluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693) RepID=G2I0G2_GLUXN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK84420.1}; TaxID=634177 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter medellinensis (strain NBRC 3288 / BCRC 11682 / LMG; 1693 / Kondo 51) (Gluconacetobacter medellinensis).;"
|
|
SCNpilot_expt_500_bf_scaffold_904_29
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30452..31618)
|
ubiquinone biosynthesis protein UbiH n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031CD28D
rbh
Ubiquinone biosynthesis protein UbiH {ECO:0000313|EMBL:AJP73652.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
|