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SCNpilot_expt_500_bf_scaffold_6933

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6933_1
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..2612)
-----------------
DNA (2610bp)
protein (870aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCP2_SPHWW rbh
CzcA family heavy metal efflux protein; K07239 heavy-metal exporter, HME family rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ABQ70058.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_500_bf_scaffold_6933_2
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2622..3731)
-----------------
DNA (1110bp)
protein (370aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=T0GC91_9SPHN rbh
Putative heavy metal efflux system protein {ECO:0000313|EMBL:KEQ55621.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
RND family efflux transporter MFP subunit rbh
SCNpilot_expt_500_bf_scaffold_6933_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3796..4491)
-----------------
DNA (696bp)
protein (232aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Histidine kinase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCP4_SPHWW rbh
histidine kinase rbh
SCNpilot_expt_500_bf_scaffold_6933_4
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4808..5485)
-----------------
DNA (678bp)
protein (226aa)
Transcriptional regulator n=2 Tax=Sphingomonadaceae RepID=T0HL22_9SPHN rbh
Transcriptional regulator {ECO:0000313|EMBL:KEQ55623.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
two component transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_6933_5
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5560..6249)
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=T0HFU0_9SPHN rbh
Cytochrome B561 {ECO:0000313|EMBL:KEQ55624.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
cytochrome B561 rbh
SCNpilot_expt_500_bf_scaffold_6933_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6317..6529)
-----------------
DNA (213bp)
protein (71aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCP7_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ70063.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Displaying 6 items

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