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SCNpilot_expt_500_bf_scaffold_8758

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8758_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..467)
-----------------
DNA (465bp)
protein (155aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631709
Uncharacterized protein {ECO:0000313|EMBL:AJP72740.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8758_2
unknown

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comp(454..582)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8758_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(582..1586)
-----------------
DNA (1005bp)
protein (335aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443, ECO:0000313|EMBL:AJP72741.1}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
bifunctional sulfur carrier protein/thiazole synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000319FB3D rbh
bifunctional sulfur carrier protein/thiazole synthase protein rbh
SCNpilot_expt_500_bf_scaffold_8758_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1668..2102
-----------------
DNA (435bp)
protein (145aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Sphingomonas melonis RepID=UPI0003703D4C
SCNpilot_expt_500_bf_scaffold_8758_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2137..2619
-----------------
DNA (483bp)
protein (161aa)
acetyl-CoA carboxylase n=1 Tax=Sphingomonas elodea RepID=UPI0002631706
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AJP72743.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
acetyl-CoA carboxylase biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
SCNpilot_expt_500_bf_scaffold_8758_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2630..3784
-----------------
DNA (1155bp)
protein (385aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AJP72744.1}; EC=6.4.1.2 {ECO:0000313|EMBL:AJP72744.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD1A4
acetyl-CoA carboxylase, biotin carboxylase
Displaying 6 items

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