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SCNpilot_expt_500_bf_scaffold_5462

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5462_1
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..398)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HDE5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97409.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
NAD-dependent epimerase/dehydratase
SCNpilot_expt_500_bf_scaffold_5462_2
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(395..1531)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G9T0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA97406.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5462_3
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1528..2076)
DNA (549bp) protein (183aa)
glutathione peroxidase (EC:1.11.1.9); K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39MM6_BURS3
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
SCNpilot_expt_500_bf_scaffold_5462_4
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2073..3311)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GEI3_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98452.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
major facilitator superfamily protein
SCNpilot_expt_500_bf_scaffold_5462_5
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3308..4108)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GCL3_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98401.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
amidohydrolase 2
SCNpilot_expt_500_bf_scaffold_5462_6
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4223..4831
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HLG4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98403.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5462_7
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4834..5409
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HG87_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98404.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
thiol-disulfide oxidoreductase domain-containing protein
SCNpilot_expt_500_bf_scaffold_5462_8
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5406..5849
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HG87_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98404.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5462_9
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5853..6365)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GEH9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98447.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5462_10
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6367..7356)
DNA (990bp) protein (330aa)
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HLK2_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98448.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
SCNpilot_expt_500_bf_scaffold_5462_11
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7353..8513)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HGC8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98449.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
putative acyl-CoA dehydrogenase
SCNpilot_expt_500_bf_scaffold_5462_12
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8516..9364)
DNA (849bp) protein (283aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
Short-chain dehydrogenase/reductase SDR n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U470_ALCXX rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KDP83876.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
SCNpilot_expt_500_bf_scaffold_5462_13
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9398..10129)
DNA (732bp) protein (244aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HB56_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA96614.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
SCNpilot_expt_500_bf_scaffold_5462_14
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10181..11545)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0FZ15_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA96615.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
paaF; enoyl-CoA hydratase
SCNpilot_expt_500_bf_scaffold_5462_15
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11630..12457)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G989_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA96617.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_5462_16
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12641..13519
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HGE6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA96618.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
iclR; Transcriptional regulator kdgR
SCNpilot_expt_500_bf_scaffold_5462_17
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13559..14779
DNA (1221bp) protein (407aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U7B2_9PROT rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EMD83883.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
acyl-CoA transferase rbh
SCNpilot_expt_500_bf_scaffold_5462_18
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14843..16018
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0FZ20_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA96620.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
acetyl-CoA acetyltransferase rbh
SCNpilot_expt_500_bf_scaffold_5462_19
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16040..17083
DNA (1044bp) protein (348aa)
putative fatty-acid--CoA ligase (EC:6.2.1.-)
Putative AMP-dependent synthetase and ligase n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N2U0_9PSED
Putative AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIK95780.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
Displaying 19 items

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