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SCNpilot_expt_500_bf_scaffold_5519

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5519_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..910)
DNA (909bp) protein (303aa)
NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E609D6
NADH-quinone oxidoreductase chain 13 {ECO:0000313|EMBL:AJP71864.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
proton-translocating NADH-quinone oxidoreductase subunit M
SCNpilot_expt_500_bf_scaffold_5519_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(907..2988)
DNA (2082bp) protein (694aa)
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003183742 rbh
NADH:ubiquinone oxidoreductase subunit L {ECO:0000313|EMBL:AJP71865.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
NADH:ubiquinone oxidoreductase subunit L
SCNpilot_expt_500_bf_scaffold_5519_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2988..3293)
DNA (306bp) protein (102aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456, ECO:0000313|EMBL:AJP71866.1}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
NADH-ubiquinone oxidoreductase, chain 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E83488
SCNpilot_expt_500_bf_scaffold_5519_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3290..3901)
DNA (612bp) protein (204aa)
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031D0404 rbh
NADH:ubiquinone oxidoreductase subunit J {ECO:0000313|EMBL:AJP74384.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
SCNpilot_expt_500_bf_scaffold_5519_5
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3935..4420)
DNA (486bp) protein (162aa)
nuoI; NADH dehydrogenase I chain I; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3]
NADH dehydrogenase subunit I n=1 Tax=Sphingomonas RepID=UPI0002631A73 rbh
Tax=GWF1_Sphingomonadales_63_6_curated
SCNpilot_expt_500_bf_scaffold_5519_6
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4420..4854)
DNA (435bp) protein (145aa)
Strain SA-120 Contig349, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01441.1}; Flags: Fragment;; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
SCNpilot_expt_500_bf_scaffold_5519_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4856..5317)
DNA (462bp) protein (154aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; EC=1.6.99.5 {ECO:0000313|EMBL:AJP71868.1};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
respiratory-chain NADH dehydrogenase subunit 1; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Sphingomonas elodea RepID=UPI0002631A74
Displaying 7 items

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