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SCNpilot_expt_500_bf_scaffold_10062

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10062_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..466)
DNA (465bp) protein (155aa)
AsnC family transcriptional regulator n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FAEC25
AsnC family transcriptional regulator {ECO:0000313|EMBL:AJP72299.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
AsnC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_10062_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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580..1686
DNA (1107bp) protein (369aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183, ECO:0000313|EMBL:AJP72300.1}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] rbh
alanine dehydrogenase n=1 Tax=Sphingomonas elodea RepID=UPI00026304EA rbh
SCNpilot_expt_500_bf_scaffold_10062_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1744..2250)
DNA (507bp) protein (169aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAH1_MESCW
N-acetyltransferase GCN5
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_expt_500_bf_scaffold_10062_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2298..2960)
DNA (663bp) protein (221aa)
cytochrome c biogenesis factor-like protein n=1 Tax=Sphingomonas elodea RepID=UPI00026304EB
Uncharacterized protein {ECO:0000313|EMBL:AIT05685.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
cycH; cytochrome c biogenesis factor
SCNpilot_expt_500_bf_scaffold_10062_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2960..3235)
DNA (276bp) protein (92aa)
cytochrome C biogenesis protein n=1 Tax=Sphingomonas elodea RepID=UPI00026304EC
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AJP74458.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
cytochrome C biogenesis protein
SCNpilot_expt_500_bf_scaffold_10062_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3186..3860)
DNA (675bp) protein (225aa)
alkyl hydroperoxide reductase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00037E002E
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AJP72301.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ccmG; cytochrome c biogenesis protein CcmG; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
SCNpilot_expt_500_bf_scaffold_10062_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3857..4978)
DNA (1122bp) protein (374aa)
cytochrome C assembly protein n=1 Tax=Sphingomonas elodea RepID=UPI00026304EE
Cytochrome C biogenesis protein CcmF {ECO:0000313|EMBL:AJP72302.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
cytochrome c assembly protein; K02198 cytochrome c-type biogenesis protein CcmF
Displaying 7 items

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