ggKbase home page

SCNpilot_expt_500_bf_scaffold_10163

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10163_1
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

547..2511
DNA (1965bp) protein (655aa)
TonB-dependent receptor n=1 Tax=Sphingobium sp. AP49 RepID=J2WBQ8_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:EJK80020.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
TonB-dependent receptor
SCNpilot_expt_500_bf_scaffold_10163_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2574..3917)
DNA (1344bp) protein (448aa)
SpsF n=1 Tax=Sphingomonas sanxanigenens RepID=U6BRK6_9SPHN rbh
SpsF {ECO:0000313|EMBL:AHA38088.1}; TaxID=397260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens.;"
major facilitator superfamily protein rbh
SCNpilot_expt_500_bf_scaffold_10163_3
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3958..5187)
DNA (1230bp) protein (410aa)
Putative TetR family transcriptional regulator n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C1D7_9SPHN rbh
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:EIZ77587.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
putative TetR family transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_10163_4
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5607..7352
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HQM2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB15337.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
TonB-dependent receptor
SCNpilot_expt_500_bf_scaffold_10163_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7535..8404
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H063_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP71931.1}; Flags: Precursor;; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
protein tyrosine/serine phosphatase
SCNpilot_expt_500_bf_scaffold_10163_6
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8677..9111)
DNA (435bp) protein (145aa)
UPI0003D66646 related cluster n=1 Tax=unknown RepID=UPI0003D66646
Membrane protein {ECO:0000313|EMBL:ETI64466.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10163_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9186..9695)
DNA (510bp) protein (170aa)
ATPase AAA n=1 Tax=Sphingomonas elodea RepID=UPI000263109A
ATPase AAA {ECO:0000313|EMBL:AJP72559.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Mg chelatase-like protein; K07391 magnesium chelatase family protein
Displaying 7 items

View Taxonomy