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SCNpilot_expt_500_bf_scaffold_4187

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4187_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..593)
DNA (591bp) protein (197aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
cysteinyl-tRNA synthetase n=1 Tax=Sphingomonas elodea RepID=UPI0002630684
SCNpilot_expt_500_bf_scaffold_4187_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(709..927)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630686
Uncharacterized protein {ECO:0000313|EMBL:AJP71518.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4187_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1347..2030
DNA (684bp) protein (228aa)
protein-L-isoaspartate O-methyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002630688 rbh
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:AJP74322.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
protein-L-isoaspartate O-methyltransferase
SCNpilot_expt_500_bf_scaffold_4187_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2045..3646
DNA (1602bp) protein (534aa)
membrane protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000300C1FF rbh
Membrane protein {ECO:0000313|EMBL:AJP71520.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
outer membrane channel protein TolC; K12340 outer membrane channel protein
SCNpilot_expt_500_bf_scaffold_4187_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3683..4174
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAC9E
Uncharacterized protein {ECO:0000313|EMBL:AJP71521.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein; K09991 hypothetical protein
SCNpilot_expt_500_bf_scaffold_4187_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4296..6365
DNA (2070bp) protein (690aa)
peptidase S9 n=1 Tax=Sphingomonas elodea RepID=UPI000263068B rbh
Peptidase S9 {ECO:0000313|EMBL:AJP71522.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
peptidase S9 prolyl oligopeptidase
Displaying 6 items

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