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SCNpilot_expt_500_bf_scaffold_4256

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4256_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..5893)
DNA (5892bp) protein (1964aa)
hypothetical protein, partial n=1 Tax=Sphingomonas elodea RepID=UPI000263138B
Uncharacterized protein {ECO:0000313|EMBL:GAD50929.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
membrane protein of unknown function
SCNpilot_expt_500_bf_scaffold_4256_2
unknown

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comp(6117..6977)
DNA (861bp) protein (287aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4256_3
unknown

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7015..7191
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4256_4
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7252..8565
DNA (1314bp) protein (438aa)
Sodium:galactoside symporter family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NER7_9SPHN
Sodium:galactoside symporter family protein {ECO:0000313|EMBL:EAT09283.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
major facilitator superfamily protein
SCNpilot_expt_500_bf_scaffold_4256_5
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8641..11007
DNA (2367bp) protein (789aa)
Outer membrane receptor protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GDG7_9CAUL rbh
TonB-dependent receptor {ECO:0000313|EMBL:AHE51863.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
TonB-dependent receptor plug
SCNpilot_expt_500_bf_scaffold_4256_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11079..12302
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Pseudoalteromonas haloplanktis RepID=UPI0002E083DF rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ81964.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4256_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12600..12839)
DNA (240bp) protein (80aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517, ECO:0000313|EMBL:AJP72416.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
branched-chain amino acid aminotransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002631691
Displaying 7 items

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