ggKbase home page

SCNpilot_expt_500_bf_scaffold_605_18

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(12940..13866)

Top 3 Functional Annotations

Value Algorithm Source
ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 315.0
  • Bit_score: 419
  • Evalue 1.10e-114
Riboflavin biosynthesis protein RibD n=1 Tax=Sphingomonas sp. S17 RepID=F3WYB1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 313.0
  • Bit_score: 454
  • Evalue 7.60e-125
  • rbh
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:AJP74673.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 305.0
  • Bit_score: 468
  • Evalue 7.10e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGGGCGCCGCGCTTGCGCTGGCCGAGCGCGGGCGGGGGCGAAGCGCGCCCAATCCCAATGTCGGCTGCGTGATCGAGCGGGACGGAATCGTGGTCGGCCGCGGCTGGACCCAGCCGGGCGGCCGCCCCCATGCCGAGGCGATGGCGCTGGCCCAGGCAGGGGAGAAGTCGCGCGGCGCGACTTGCTACGTCACGCTCGAGCCCTGCGCGCACGAATCGCCGCGCGGCCCGGCCTGTTCGAGCCTGCTCGTGGCGGCCGGCGTCGCCCGGGGGGTGATCGCGCTCGGCGATCCCGATCCGCGCACCAATGGGGCGGGAGCCGCCCGCCTGCGCGCCGCCGGGATCGACGTGGTGGAGGGCGTCCGCGCCGCCGAGGCGCGCCGTTCCATGGCCGGCTTCCTGACGCGGCTGGAAAAGGGGCGTCCGTTCGTCACGCTCAAGCTGGCGACTTCGCTCGATGGCCGCATCGCGCTTCCCTCGGGCGAGAGCCGCTGGATCACGGGCGCGCAGGCCCGCGCCCATACCCATCTGGAGCGTGCCCGGCACCAGGCGATCCTGGTCGGCCGGCGGACCATGGAAGTCGACCGCCCCCGGCTCGACGTGCGCCTGCCGGGACTCGAGGATCGCTCGCCGCGCCGGCTCGTGCTGTCCTCGACCGGCGATGTCGAGCGGCCCGAGGACATTGCCGGCCTCGAGGGCATCGACCTTCTCTTCGTCGAGGGCGGCGCCGAGACGGGCTCGGCCTTTCTCCGCGCCGACCTGGTCGACAGGCTGCTGCTCTATCGCGCGCCGATCCTGATCGGGCAGGGCAGGGCGGCGCTCGGCGATATCGGGCTCGCCCGGCTGGACGATGCCCATGGCCGCTGGCGGCTGGTCGACGGCCGCATGCTTGGCAGTGACAGGCTGGAGGTCTACGAGCGCGCATAA
PROTEIN sequence
Length: 309
MGAALALAERGRGRSAPNPNVGCVIERDGIVVGRGWTQPGGRPHAEAMALAQAGEKSRGATCYVTLEPCAHESPRGPACSSLLVAAGVARGVIALGDPDPRTNGAGAARLRAAGIDVVEGVRAAEARRSMAGFLTRLEKGRPFVTLKLATSLDGRIALPSGESRWITGAQARAHTHLERARHQAILVGRRTMEVDRPRLDVRLPGLEDRSPRRLVLSSTGDVERPEDIAGLEGIDLLFVEGGAETGSAFLRADLVDRLLLYRAPILIGQGRAALGDIGLARLDDAHGRWRLVDGRMLGSDRLEVYERA*