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SCNpilot_expt_500_bf_scaffold_605_28

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 23129..23989

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F36C20 similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 286.0
  • Bit_score: 458
  • Evalue 6.40e-126
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AJP73563.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 284.0
  • Bit_score: 455
  • Evalue 5.80e-125
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 284.0
  • Bit_score: 368
  • Evalue 1.60e-99

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
GTGCAGGTGGCGCGGCTCGGCTCGATCAAGGCCGCCGCGGAGGAGCTGGCGCTCTCCTCGCCCGCGCTGAGCCGTCGCGTCCAGGCGCTCGAGCGCTTCATCGGCAAGCCGCTGTTCGAGCGCCGGCACCAGGCGCTGCGCCTCAACGACGATGGCGAGCGGCTGCTCGGCATGATCGCGCCGGCGCTCGACACCATGGCCGACGCGGTGGAGACGATGACCAGCGGCACCGAGCTGCTGCGTCTGCGCCTGGGCATCCTGCCGCTTTTCGCGACGCAGCGGCTGATGCCGCACATGGGCGACCTGAAGCGCGAGCATCCCGAGCTGCATCTCGACGTCGATACCGGCGCGCACGCCGTGGCGCGGCTCGGCGACGGGCTCGACGCCGCGATCGTGGTGGCGCGCGACATCGATCCGACGCTCTACGCCAAGCGGCTCGACCGGAACCGCGTCTATGTGATCGGCGCGCGCGCGCTGGTGGAAGGGCCCGATCCCATCACCCGGCCCGAGCAGCTTTCGAAGCTGACCGCGCTGGTGCACCGCGACATGGCGGACACGTTCACCGCCTGGCGCGCCGCGGCGGGGCTGTCGCACCTGGAGATCGAGCCCGCGGCGATCGACCATTTCGATTCGGGCACATTGATGCTCGAAGCGGCGGCGCAGGGGCTGGGTGTCGCCTTCATGCTCGAATCGCATTTCGAGGCGGCGCGCGACGACCGGCTCGTCCAGCTCTTCGACCTGACCGTGGACAGCGACTACAGCTACTGGTTCGTCTGCCGGCCGCGCGCGCTGACCACGCGGCCGGTGAAGCTGTTCCACGACTGGCTGATCGAAGTGCTCCACGCCGACCGGGTGGAATAG
PROTEIN sequence
Length: 287
VQVARLGSIKAAAEELALSSPALSRRVQALERFIGKPLFERRHQALRLNDDGERLLGMIAPALDTMADAVETMTSGTELLRLRLGILPLFATQRLMPHMGDLKREHPELHLDVDTGAHAVARLGDGLDAAIVVARDIDPTLYAKRLDRNRVYVIGARALVEGPDPITRPEQLSKLTALVHRDMADTFTAWRAAAGLSHLEIEPAAIDHFDSGTLMLEAAAQGLGVAFMLESHFEAARDDRLVQLFDLTVDSDYSYWFVCRPRALTTRPVKLFHDWLIEVLHADRVE*