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SCNpilot_expt_500_bf_scaffold_733_5

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(5244..6746)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 473.0
  • Bit_score: 440
  • Evalue 4.40e-120
periplasmic sensor signal transduction histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 494.0
  • Bit_score: 387
  • Evalue 7.60e-105
  • rbh
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HTZ0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 485.0
  • Bit_score: 435
  • Evalue 7.70e-119
  • rbh

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Taxonomy

Sphingobium herbicidovorans → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1503
ATGACGACCGGACGACCAAATCCCCTCATCGGTTTCCTGACGGCGCGGCTGCATCTCGATCGCGCCGGCCTGCTCCGCACTGCGATCGTCCTCACCTTGTCCGCCATGGCGGCATTCGCCGTTCATCCGCTGGGCGAAGTCGCCTCGGCGCTGGTGTTCGTGCTCGGCATCACGGTGGCGGGTGCGCTGAGCGGGCTCGCATCGGCCCTGATCGCCGCGCTCGCGGCCTTTCTGATCTACAATTTCTACCTGACCGAGCCGGCCCTCACCTTCCGGATCGCGACGGGCGGCGACCTCGCGCCGCTTGTGGTGTTCAACCTGTGCGCGCTGGTTTCCGGCGTGCTTGCCGGACAGCTCAAGGACCATGCCCTGGCGGCGCGATCGAGCAACCTTCAGCTCAACAGCCTGCTGGCGCTCAGCCAGGAACTCCAGTCGGCGGCGCGCCCTTCCGATGTCGTCGTCACCGTCGAGCGGGCCGTGCACCGGATCCTCGGGGCCCGGGCAACGCTCTTCCAGGCCGACGAGGATGGGCTGCGCTGCCTCTCGGCACTGCCATGCGAGGCGAGCTGGCACGACTTCGCGAACGGGATCGCGCACGCCCCCCAGGTCTCCGGAGACAGCCCGCTGATCGGCAGGCGCCTCGAACTCGCCAATGCGCCGGTCACCGTGCTCGTGCTCGAGCCGCTGCGGCCGGGAAAGATCAAGCCGGCCTTCATCGATGCGGTTGCCAACATGGTCGCGCTGACGCTCGAGCGCGCGGCGCTGTCCGAACAGATCACCGAGCGCCGCGCCGTCGCCCGCGCCGAGAAGCTGAAGAGCGCGCTGCTCGCCTCGGTCAGCCATGATTTCCGCACGCCCCTCACCGCGATCAGCGCGTCGGCATCCAGCCTGATCGCCTATGGCGAGAAGCTCGACGCCGAAACCTCCGCGCGCCTGCTGCGCGGCGTGGTCGACGAGTGCGAGCGCCTCAATCGCTATACGGCAAATCTGCTCGAGATGAGCCGGATGGAGGCCGGCGGCATCGCGCAGCCGCTCCAGATCCTTGGCGCCGCCGAAATGGCCGGCGCGGCGCTGCACCGGATCCGGCCGCGCGCGGGCGGGCGGCAAGTGACGCTGCACGCACCGGACCCGGACCTGCCGGTCGCCGCCAACCCCGCGCTGTTCGAGTTGGTGCTGCTCAACATCCTGGACAATGCGATCCTCTACAGCGACGAAGGCGCCCGGGTGGAAATCGCCATATCCGCCGAGGACGGCGCCTGCCGCATCGACATAGCGGACAGCGGACAAGGCATACCGGAACACGCGCTCCAGCGGGTGTTCGAGCGTTTCTACCGTGCCGGCAGGCCCGATACGACCGGACGCGGCAGCGGGCTGGGGCTGGCGATCGCAAAGGGCTTCGTGGAAGCGCTGGGCGGCACCATCCACGCCACGATCCCCGGGCTGGACGGCCGCGGGACCCGCATCACCATCCGACTTCCGCTCGCCGAGGCTATGCAAGCATGA
PROTEIN sequence
Length: 501
MTTGRPNPLIGFLTARLHLDRAGLLRTAIVLTLSAMAAFAVHPLGEVASALVFVLGITVAGALSGLASALIAALAAFLIYNFYLTEPALTFRIATGGDLAPLVVFNLCALVSGVLAGQLKDHALAARSSNLQLNSLLALSQELQSAARPSDVVVTVERAVHRILGARATLFQADEDGLRCLSALPCEASWHDFANGIAHAPQVSGDSPLIGRRLELANAPVTVLVLEPLRPGKIKPAFIDAVANMVALTLERAALSEQITERRAVARAEKLKSALLASVSHDFRTPLTAISASASSLIAYGEKLDAETSARLLRGVVDECERLNRYTANLLEMSRMEAGGIAQPLQILGAAEMAGAALHRIRPRAGGRQVTLHAPDPDLPVAANPALFELVLLNILDNAILYSDEGARVEIAISAEDGACRIDIADSGQGIPEHALQRVFERFYRAGRPDTTGRGSGLGLAIAKGFVEALGGTIHATIPGLDGRGTRITIRLPLAEAMQA*