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SCNpilot_expt_500_bf_scaffold_760_19

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(17882..19165)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 429.0
  • Bit_score: 556
  • Evalue 3.60e-155
thdF; tRNA modification GTPase; K03650 tRNA modification GTPase [EC:3.6.-.-] similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 430.0
  • Bit_score: 443
  • Evalue 7.60e-122
tRNA modification GTPase TrmE n=1 Tax=Sphingomonas elodea RepID=UPI0002631610 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 428.0
  • Bit_score: 565
  • Evalue 5.50e-158
  • rbh

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGGACACGATCTACGCGGTCTCGAGCGGCGCGCTTCCCGCCGCGATTGCCGTGCTGCGCGTGAGCGGGCCGTGCGCTTTCGATATGGTGCGCGATTTCGCCGGAGATCTGCCTGCGCCGCGCCGCGCTGCGGTGCGGGCCCTGCACGATCCCGCCGATGGCAGCTTGCTCGATCGCGCGCTCATCCTCTGCTTCCCGGGTCCGCGCAGCGCGACGGGGGAGGATCTTGCCGAACTCCATCTCCATGGCGGCCGCGCGGTGGTCCGCGCAGTCGAGGCGGCGCTGGCTGGCCGATCCGGGCTCCGACCGGCCGAGCCGGGTGAATTCACCCGGCGGGCGCTGTTGCACGGCCGGATCGACCTGAGCGAAGCCGAAGGGCTGGGCGACCTGCTGATGGCCGAGACCGAAGCGCAGCGCCGGTCCGCGATCCGATCGGCGGAAGGGGCGGTTCGCCGGGCAGTCGAGGGCTGGACCGACCGGCTGTTGATGCTTGCTGCGCGCGTCGAGGCCGAGCTCGATCACAGCGATGAGGACGATGTCGCCGATGCCGCACTGCTTCCGGCGCTCCGATCCGGTGCCGCGGCGCTGGCGGAGGATATCGAGGCAGTGGCGGATCGCCCGCCGGTCGAGCGATTGCGCGACGGGATCCGCGTCGTGCTCGCGGGGCCACCCAATGCCGGCAAGTCCTCACTACTCAATAGGATGATCGGGCGCGACGCGGCGATCGTCTCGCCGATCTCGGGCACGACCCGCGATCGGATCGAGGCGCCGGTGGTGCGGGGCGGGACCGCCTGGCTGCTTATCGATACGGCAGGATTGGCGGCACTGCCCGGCGACGAGATCGAAGCGATCGGCATTGCGCGGGCCCAGGCAGCGCAAGCCGAGGCGGATATCCTGCTCTGGCTGGGGGACGAACCGCCACCGGAACATGCGCACTGCCTCTGGCTCAATCCGCGCGCGGACCTGCCGGGGCGTATGGCGGCGGCGGATCGGCTGTCGCTGTCGTCGCTTACGGGCGAGGGGCTGGATGCGCTGTGGAGTGCGATGGCGCAGCTTGCCGCCGATATGCTCCCGCCGACCGACCAGATGGCGCTCAACGCTCGTCAGCGTGCGCTTTCCCGGAATGCTGCCAGCGCGTTGCGGGCCGCCCAGCGGGAGGAGGATCTGCTCCTGATCGCGGAGCAGCTGCGCAGCGCGATGCGCGCGTTCGATGCCATCACCGGGCGGGCAGGGGTGGAGGCGATGCTGGACGCGCTGTTCGCGCGATTCTGCATCGGCAAATAG
PROTEIN sequence
Length: 428
MDTIYAVSSGALPAAIAVLRVSGPCAFDMVRDFAGDLPAPRRAAVRALHDPADGSLLDRALILCFPGPRSATGEDLAELHLHGGRAVVRAVEAALAGRSGLRPAEPGEFTRRALLHGRIDLSEAEGLGDLLMAETEAQRRSAIRSAEGAVRRAVEGWTDRLLMLAARVEAELDHSDEDDVADAALLPALRSGAAALAEDIEAVADRPPVERLRDGIRVVLAGPPNAGKSSLLNRMIGRDAAIVSPISGTTRDRIEAPVVRGGTAWLLIDTAGLAALPGDEIEAIGIARAQAAQAEADILLWLGDEPPPEHAHCLWLNPRADLPGRMAAADRLSLSSLTGEGLDALWSAMAQLAADMLPPTDQMALNARQRALSRNAASALRAAQREEDLLLIAEQLRSAMRAFDAITGRAGVEAMLDALFARFCIGK*