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SCNpilot_expt_500_bf_scaffold_760_24

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(21741..22997)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884, ECO:0000313|EMBL:AJP73601.1}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 418.0
  • Bit_score: 787
  • Evalue 1.20e-224
transcription termination factor Rho n=1 Tax=Sphingomonas elodea RepID=UPI0002631615 similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 418.0
  • Bit_score: 791
  • Evalue 3.60e-226
  • rbh
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 418.0
  • Bit_score: 785
  • Evalue 8.00e-225
  • rbh

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCATCTCAAGGACCTCAAGAAGAAAGCCCCCGCCGAACTGGTCTCGATGGCCGAAGAGCTCGGCGTCGAGAGCGCTTCGACTTTGCGCAAGCAGGATCTGCTCTTCGCGATCCTCAAGGCACAGGCCGAGCAGGGCGACCAGATCATGGGCGAGGGCACGATTGAAGTGCTGCCCGACGGCTTCGGCTTCCTGCGCAGCCCCGAGGCGAATTATCTCGCCGGCCCCGACGACATCTATGTCTCGCCCAACCAGGTCCGCAAGTTCGGCCTGCGCACCGGCGATACGGTGGAAGGCGAGATTCGCGCGCCCAAGGACGGCGAACGCTATTTCGCGCTCACGCGCCTGGTCTCGGTCAATTTCGACGATCCCGATGCGGTCCGCCACCGCGTCAACTTCGACAACCTCACGCCGCTCTATCCCGAGCAGAAGCTGACGCTCGACAGCCTCGATCCGACGATCAAGGACAAGTCGGCGCGCGTGATCGACATCGTCGCGCCGCAGGGCAAGGGCCAGCGCGCGCTGATCGTGGCGCCGCCGCGCGTCGGCAAGACCGTGCTGCTCCAGAACATCGCCAAGGCGATCACCGACAATCACCCCGAGGTCTTCCTCATCGTGCTGCTCATCGACGAGCGCCCCGAGGAAGTGACCGACATGCAGCGCAGCGTGAAGGGCGAAGTGATTTCCTCGACCTTCGACGAGCCGGCGCAGCGCCACGTCCAGGTCTCCGAGATGGTGATCGAGAAGGCCAAGCGCCTGGTCGAGCACAAGAAGGACGTGGTGATCCTGCTCGATTCGATCACGCGCCTCGGCCGCGCCTACAACACGGTGGTGCCGTCGTCGGGCAAGGTGCTCACCGGCGGCGTCGACGCGAACGCCCTGCAGCGCCCGAAGCGTTTCTTCGGTGCCGCGCGCAACATCGAGGAAGGCGGTTCGCTCTCGATCATCGCCACGGCGCTGATCGACACCGGCAGCCGCATGGACGAAGTGATCTTCGAAGAGTTCAAGGGCACCGGCAACTCGGAAATCGTCCTCGACCGCAAGGTGGCCGACAAGCGCATCTTCCCGGCGCTCGACGTCGGCAAGTCGGGCACCCGCAAGGAGGAGCTGCTGGTCGACAAGTCCAAGCTCACCAAGATGTGGGTGCTGCGCCGCATCCTCATGCAGATGGGCACCGTCGATGCGATGGAATTCCTGCTCGACAAGATGAAGGATTCGAAGACCAACGAGGACTTCTTCGACAGCATGAACCAGTGA
PROTEIN sequence
Length: 419
MHLKDLKKKAPAELVSMAEELGVESASTLRKQDLLFAILKAQAEQGDQIMGEGTIEVLPDGFGFLRSPEANYLAGPDDIYVSPNQVRKFGLRTGDTVEGEIRAPKDGERYFALTRLVSVNFDDPDAVRHRVNFDNLTPLYPEQKLTLDSLDPTIKDKSARVIDIVAPQGKGQRALIVAPPRVGKTVLLQNIAKAITDNHPEVFLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAQRHVQVSEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDVGKSGTRKEELLVDKSKLTKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFDSMNQ*